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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0268000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.53 (0.0341) R2 : 0.000111
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0162 (0.0718) R2dN8 : 0.000144 R2N8 : 0.000111
σ : 0.642
deviance : 189.35
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
162.16 0.598 3.45 0.816 0.248 0.872 0.528 -1.12 0.273 9.54 23.8 717 -- --
163.14 0.595 3.48 0.653 0.249 1.11 0.281 -- 0.227 10 22.89 594 -- --
162.86 0.594 3.47 0.759 0.261 0.948 -- -0.764 0.246 9.88 23.2 613 -- --
163.4 0.595 3.48 0.668 0.249 1.1 -- -- 0.226 10.2 22.9 592 -- --
166.32 0.601 3.47 0.782 -- 1.06 -- -0.629 0.271 -- 23.4 702 -- --
177.84 0.625 3.51 0.384 0.351 -- 0.22 -- 0.0587 9.81 -- -- -- --
178.02 0.625 3.51 0.393 0.35 -- -- -- 0.0593 9.86 -- -- -- --
166.78 0.601 3.48 0.696 -- 1.18 -- -- 0.249 -- 23.1 687 -- --
173.72 0.614 3.5 -- 0.278 0.774 -- -- 0.113 9.96 23 573 -- --
185.35 0.636 3.52 0.389 -- -- -- -- 0.0594 -- -- -- -- --
182.09 0.631 3.52 -- 0.349 -- -- -- 0.0155 9.78 -- -- -- --
178.04 0.621 3.51 -- -- 0.861 -- -- 0.129 -- 23.2 667 -- --
189.35 0.642 3.53 -- -- -- -- -- 0.0162 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 155.27 temperature 25 720 < th dose dependent rect. 1 2
4 155.48 humidity 90 14400 > th dose dependent rect. 21 4
8 155.57 temperature 10 720 > th dose dependent rect. 20 14
15 155.83 temperature 30 720 < th dose dependent rect. 24 9
18 155.92 temperature 30 720 < th dose dependent rect. 24 7
19 155.94 temperature 15 720 > th dose dependent sin 8 NA
28 156.01 humidity 90 14400 > th dose dependent rect. 22 1
34 156.10 humidity 90 14400 > th dose dependent rect. 18 9
38 156.15 temperature 30 720 < th dose dependent rect. 23 12
41 156.19 humidity 90 14400 > th dose dependent rect. 18 13
50 156.24 temperature 30 720 < th dose dependent sin 9 NA
65 156.36 humidity 90 14400 > th dose dependent sin 13 NA
86 156.47 temperature 30 720 < th dose dependent rect. 21 15
102 156.58 temperature 30 720 < th dose dependent rect. 19 17
130 156.77 temperature 10 720 > th dose dependent rect. 2 7
212 157.20 temperature 10 720 > th dose dependent rect. 21 17
236 157.34 humidity 90 14400 > th dose independent rect. 18 11
253 157.41 wind 9 43200 > th dose dependent rect. 13 19
258 157.45 humidity 90 14400 > th dose dependent rect. 4 4
260 157.46 humidity 90 14400 > th dose independent rect. 2 6
284 157.57 wind 9 43200 > th dose independent rect. 18 21
291 157.61 wind 9 43200 > th dose independent rect. 13 22
310 157.68 humidity 90 14400 < th dose independent rect. 18 11
322 157.72 wind 9 43200 > th dose independent rect. 6 9
325 157.73 wind 9 43200 > th dose dependent sin 19 NA
328 157.74 wind 9 43200 > th dose independent rect. 20 19
333 157.76 wind 9 43200 > th dose independent rect. 23 16
347 157.81 wind 9 43200 > th dose independent rect. 2 13
384 157.89 wind 9 43200 < th dose independent rect. 13 22
394 157.93 wind 9 43200 > th dose independent rect. 8 6
404 157.96 wind 9 43200 < th dose independent rect. 18 21
408 157.97 wind 9 43200 < th dose independent rect. 6 9
411 157.98 wind 9 43200 < th dose independent rect. 23 16
425 158.01 wind 9 43200 > th dose dependent rect. 9 12
448 158.06 wind 9 43200 > th dose independent rect. 23 22
460 158.08 wind 9 43200 < th dose independent rect. 2 13
461 158.08 wind 9 43200 < th dose independent rect. 20 19
488 158.14 wind 9 43200 < th dose independent rect. 7 7
492 158.14 wind 9 43200 > th dose dependent rect. 9 14
493 158.15 wind 9 43200 > th dose independent sin 2 NA
498 158.15 wind 9 43200 > th dose independent rect. 5 16
500 158.15 wind 9 43200 > th dose dependent rect. 9 16
539 158.22 wind 9 43200 > th dose independent rect. 2 19
554 158.25 wind 9 43200 > th dose dependent rect. 9 6
561 158.26 humidity 90 14400 > th dose dependent no NA NA
567 158.27 wind 7 43200 > th dose dependent rect. 6 9
568 158.27 wind 9 43200 > th dose dependent rect. 17 22
572 158.29 wind 9 43200 > th dose independent rect. 5 20
573 158.29 wind 9 43200 > th dose independent rect. 5 22
611 158.35 temperature 15 720 > th dose dependent rect. 3 2
622 158.37 humidity 90 14400 > th dose independent sin 11 NA
625 158.37 wind 9 43200 > th dose independent rect. 2 23
653 158.40 humidity 90 14400 > th dose dependent rect. 2 23
654 158.41 wind 9 43200 > th dose independent no NA NA
663 158.42 wind 9 43200 < th dose independent sin 3 NA
686 158.45 humidity 90 14400 > th dose dependent rect. 3 7
723 158.50 wind 7 43200 > th dose dependent sin 2 NA
736 158.53 radiation 30 4320 < th dose independent rect. 7 1
751 158.55 wind 9 43200 < th dose independent rect. 23 22
756 158.56 radiation 30 4320 < th dose independent rect. 18 14
770 158.58 temperature 30 270 < th dose dependent rect. 7 5
781 158.60 radiation 30 4320 < th dose independent rect. 5 3
811 158.63 wind 9 43200 > th dose dependent rect. 4 17
812 158.63 wind 7 43200 > th dose dependent rect. 23 17
823 158.64 wind 9 43200 > th dose dependent rect. 24 21
843 158.66 wind 9 43200 > th dose dependent rect. 22 23
844 158.67 radiation 30 4320 < th dose independent rect. 23 9
856 158.68 radiation 30 4320 < th dose independent rect. 3 5
870 158.69 temperature 10 270 > th dose dependent sin 4 NA
886 158.71 wind 9 43200 < th dose independent rect. 5 16
916 158.73 wind 9 43200 > th dose dependent rect. 19 21
940 158.76 wind 9 43200 < th dose independent rect. 23 20
961 158.78 wind 9 43200 < th dose independent rect. 2 19
996 158.81 humidity 90 14400 < th dose independent sin 11 NA
998 158.81 wind 9 43200 > th dose dependent no NA NA