Os01g0267300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor I4, serpin family protein.
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Os01g0267300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor I4, serpin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 470.68 | 1.02 | 2.83 | 3.05 | 0.0724 | -22.6 | -0.215 | 143 | -0.108 | 11.4 | 995.7 | 1314 | -- | -- |
| 485.89 | 1.03 | 3.3 | 0.248 | 0.0606 | 0.862 | -0.264 | -- | -0.106 | 10.2 | 1001 | 1420 | -- | -- |
| 469.75 | 1.01 | 2.88 | 2.71 | 0.0233 | -22.9 | -- | 146 | -0.0708 | 13.7 | 996.5 | 1456 | -- | -- |
| 469.05 | 1.01 | 3.3 | 0.21 | 0.0641 | 2.09 | -- | -- | -0.0876 | 12.4 | 998.5 | 1419 | -- | -- |
| 469.61 | 1.01 | 2.92 | 2.53 | -- | -21 | -- | 135 | -0.112 | -- | 996.6 | 1444 | -- | -- |
| 493.08 | 1.04 | 3.31 | 0.326 | 0.0643 | -- | -0.26 | -- | -0.138 | 10.3 | -- | -- | -- | -- |
| 493.35 | 1.04 | 3.31 | 0.316 | 0.0656 | -- | -- | -- | -0.138 | 10.8 | -- | -- | -- | -- |
| 469.29 | 1.01 | 3.3 | 0.208 | -- | 2.08 | -- | -- | -0.0927 | -- | 998.5 | 1465 | -- | -- |
| 470.18 | 1.01 | 3.31 | -- | 0.0602 | 2.12 | -- | -- | -0.113 | 12.2 | 998.5 | 1420 | -- | -- |
| 493.62 | 1.04 | 3.31 | 0.315 | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
| 495.99 | 1.04 | 3.32 | -- | 0.0634 | -- | -- | -- | -0.174 | 10.5 | -- | -- | -- | -- |
| 469.87 | 1.01 | 3.31 | -- | -- | 2.15 | -- | -- | -0.11 | -- | 998.2 | 1802 | -- | -- |
| 496.23 | 1.04 | 3.32 | -- | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 458.03 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 8 | 462.82 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 17 | 16 |
| 11 | 463.03 | wind | 1 | 90 | < th | dose independent | rect. | 8 | 1 |
| 13 | 463.45 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 16 | 464.11 | wind | 3 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 25 | 465.03 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 34 | 465.48 | wind | 1 | 30 | < th | dose independent | rect. | 12 | 2 |
| 38 | 465.81 | wind | 1 | 30 | < th | dose dependent | rect. | 12 | 2 |
| 42 | 465.92 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 49 | 466.07 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 78 | 467.22 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 13 | 16 |
| 83 | 467.26 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 85 | 467.32 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 86 | 467.36 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 13 | 12 |
| 107 | 467.81 | temperature | 30 | 10 | > th | dose independent | rect. | 14 | 1 |
| 113 | 467.83 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 125 | 468.09 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 8 | 12 |
| 129 | 468.19 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 135 | 468.30 | atmosphere | 995 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 158 | 468.30 | atmosphere | 995 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 188 | 468.40 | atmosphere | 1000 | 1440 | < th | dose dependent | sin | 12 | NA |
| 205 | 468.63 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 221 | 468.87 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 243 | 469.15 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 268 | 469.35 | wind | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 270 | 469.36 | atmosphere | 1010 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 272 | 469.39 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 275 | 469.42 | atmosphere | 995 | 1440 | > th | dose independent | sin | 9 | NA |
| 281 | 469.45 | atmosphere | 1010 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 288 | 469.50 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 293 | 469.54 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 330 | 469.82 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 338 | 469.85 | wind | 1 | 720 | > th | dose independent | rect. | 8 | 8 |
| 341 | 469.87 | atmosphere | 995 | 1440 | < th | dose independent | sin | 9 | NA |
| 380 | 469.97 | temperature | 25 | 30 | < th | dose independent | rect. | 22 | 11 |
| 398 | 470.07 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 420 | 470.20 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 438 | 470.20 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 3 | 22 |
| 473 | 470.24 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 540 | 470.45 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 22 | 14 |
| 587 | 470.62 | atmosphere | 995 | 1440 | > th | dose independent | sin | 21 | NA |
| 659 | 470.75 | wind | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 698 | 470.82 | atmosphere | 995 | 1440 | < th | dose independent | no | NA | NA |
| 897 | 470.84 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 23 | 13 |
| 898 | 470.86 | atmosphere | 995 | 1440 | > th | dose independent | no | NA | NA |
| 904 | 470.87 | atmosphere | 995 | 1440 | < th | dose dependent | no | NA | NA |