Os01g0267100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MT-A70 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0267100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : MT-A70 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.07 | 0.513 | 13.6 | 0.564 | 0.955 | 2.24 | 0.428 | 2.61 | -0.407 | 8.38 | 24.9 | 1417 | -- | -- |
| 125.83 | 0.522 | 13.6 | 1.04 | 0.937 | 2.06 | 0.437 | -- | -0.27 | 8.14 | 25.99 | 1340 | -- | -- |
| 119.64 | 0.509 | 13.6 | 0.58 | 0.954 | 2.24 | -- | 2.59 | -0.406 | 8.43 | 24.9 | 1415 | -- | -- |
| 126.16 | 0.523 | 13.6 | 1.03 | 0.937 | 1.98 | -- | -- | -0.299 | 8.36 | 25.8 | 1385 | -- | -- |
| 140.38 | 0.552 | 13.6 | 0.773 | -- | 2.29 | -- | 1.53 | -0.396 | -- | 31.37 | 636 | -- | -- |
| 178.9 | 0.627 | 13.7 | 0.426 | 0.944 | -- | 0.43 | -- | -0.727 | 8.72 | -- | -- | -- | -- |
| 179.5 | 0.627 | 13.7 | 0.44 | 0.942 | -- | -- | -- | -0.726 | 8.77 | -- | -- | -- | -- |
| 141.95 | 0.555 | 13.6 | 1.03 | -- | 2.35 | -- | -- | -0.329 | -- | 31.89 | 640 | -- | -- |
| 150.25 | 0.571 | 13.6 | -- | 0.89 | 1.49 | -- | -- | -0.473 | 8.24 | 25.7 | 1215 | -- | -- |
| 229.82 | 0.708 | 13.7 | 0.442 | -- | -- | -- | -- | -0.719 | -- | -- | -- | -- | -- |
| 184.61 | 0.636 | 13.7 | -- | 0.943 | -- | -- | -- | -0.775 | 8.73 | -- | -- | -- | -- |
| 167.01 | 0.602 | 13.6 | -- | -- | 1.96 | -- | -- | -0.508 | -- | 32.7 | 621 | -- | -- |
| 234.96 | 0.715 | 13.7 | -- | -- | -- | -- | -- | -0.768 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 2 | 111.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 3 | 111.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 7 | 112.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 10 | 112.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 31 | 114.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 50 | 114.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 131 | 115.65 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 139 | 115.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 158 | 115.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 194 | 116.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 296 | 117.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 334 | 117.59 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 360 | 117.73 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 369 | 117.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 387 | 117.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 395 | 117.96 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 399 | 117.97 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 405 | 118.00 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 421 | 118.12 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 458 | 118.28 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 465 | 118.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 469 | 118.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 472 | 118.34 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 505 | 118.50 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 634 | 119.10 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 640 | 119.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 661 | 119.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 662 | 119.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 666 | 119.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 884 | 120.03 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |