Os01g0266400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0266400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 293.6 | 0.805 | 7.17 | -1.28 | 1.42 | -3.15 | 0.107 | 1.69 | 0.17 | 23 | 23.44 | 327 | -- | -- |
| 295.46 | 0.801 | 7.13 | -1.06 | 1.42 | -3.6 | 0.225 | -- | 0.272 | 23 | 22.74 | 330 | -- | -- |
| 293.62 | 0.798 | 7.17 | -1.27 | 1.42 | -3.2 | -- | 1.6 | 0.181 | 23 | 23.31 | 324 | -- | -- |
| 295.37 | 0.8 | 7.14 | -1.09 | 1.43 | -3.66 | -- | -- | 0.245 | 23.1 | 22.71 | 321 | -- | -- |
| 365.69 | 0.891 | 7.21 | -1.59 | -- | -3.22 | -- | 2.12 | -0.0962 | -- | 26.04 | 722 | -- | -- |
| 438.58 | 0.982 | 7.03 | -0.262 | 1.4 | -- | 0.217 | -- | 0.727 | 22.3 | -- | -- | -- | -- |
| 438.77 | 0.981 | 7.03 | -0.27 | 1.4 | -- | -- | -- | 0.727 | 22.3 | -- | -- | -- | -- |
| 371.65 | 0.898 | 7.17 | -1.16 | -- | -3.27 | -- | -- | -0.0138 | -- | 25.7 | 717 | -- | -- |
| 323.15 | 0.837 | 7.1 | -- | 1.42 | -3.09 | -- | -- | 0.422 | 22.9 | 22.84 | 308 | -- | -- |
| 558.12 | 1.1 | 7 | -0.249 | -- | -- | -- | -- | 0.731 | -- | -- | -- | -- | -- |
| 440.7 | 0.982 | 7.03 | -- | 1.4 | -- | -- | -- | 0.757 | 22.3 | -- | -- | -- | -- |
| 405.16 | 0.937 | 7.11 | -- | -- | -2.88 | -- | -- | 0.219 | -- | 25.7 | 713 | -- | -- |
| 559.76 | 1.1 | 6.99 | -- | -- | -- | -- | -- | 0.758 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 287.05 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 21 |
| 13 | 293.17 | temperature | 15 | 270 | > th | dose dependent | sin | 8 | NA |
| 26 | 296.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 31 | 296.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 23 |
| 34 | 296.99 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 43 | 297.86 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 64 | 299.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 70 | 300.07 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 23 |
| 82 | 300.39 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 88 | 300.68 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 23 |
| 91 | 300.75 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 111 | 302.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 14 |
| 115 | 302.48 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 116 | 302.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 133 | 302.94 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 137 | 303.00 | humidity | 90 | 14400 | > th | dose dependent | sin | 8 | NA |
| 160 | 303.46 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 21 |
| 181 | 303.86 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 214 | 304.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 246 | 305.30 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 264 | 305.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 290 | 306.13 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 375 | 307.91 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 19 |
| 431 | 309.22 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 23 |
| 461 | 309.56 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 470 | 309.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 472 | 309.75 | temperature | 25 | 270 | < th | dose dependent | sin | 7 | NA |
| 510 | 310.19 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 23 |
| 519 | 310.30 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 581 | 311.02 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 601 | 311.24 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 23 |
| 647 | 311.72 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 704 | 312.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 713 | 312.62 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 23 |
| 716 | 312.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 720 | 312.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 757 | 313.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 770 | 313.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 779 | 313.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 780 | 313.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 795 | 313.29 | temperature | 20 | 270 | < th | dose independent | rect. | 8 | 23 |
| 811 | 313.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 818 | 313.46 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 23 |
| 856 | 313.63 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 21 |
| 897 | 313.84 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 900 | 313.85 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 925 | 314.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 934 | 314.05 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 939 | 314.08 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 954 | 314.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |