Os01g0265400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0265400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.24 | 0.489 | 8.15 | -1.46 | 1.6 | -1.5 | 1.22 | -1.21 | 0.437 | 1.7 | 24.2 | 14 | -- | -- |
| 110.09 | 0.492 | 8.17 | -1.63 | 1.58 | -1.38 | 0.827 | -- | 0.404 | 1.7 | 24.2 | 14 | -- | -- |
| 112.6 | 0.498 | 8.17 | -1.61 | 1.59 | -1.42 | -- | -0.282 | 0.409 | 1.69 | 24.13 | 10 | -- | -- |
| 112.68 | 0.494 | 8.17 | -1.64 | 1.56 | -1.39 | -- | -- | 0.412 | 1.72 | 24.1 | 60 | -- | -- |
| 247.1 | 0.736 | 8.12 | -1.41 | -- | -0.465 | -- | 0.532 | 0.607 | -- | 21.2 | 13 | -- | -- |
| 137.54 | 0.55 | 8.11 | -1.31 | 1.35 | -- | 0.848 | -- | 0.635 | 1.83 | -- | -- | -- | -- |
| 140.34 | 0.555 | 8.12 | -1.34 | 1.35 | -- | -- | -- | 0.63 | 1.83 | -- | -- | -- | -- |
| 199.55 | 0.658 | 8.19 | -1.81 | -- | -1.79 | -- | -- | 0.27 | -- | 29.1 | 1036 | -- | -- |
| 178.4 | 0.625 | 8.11 | -- | 1.44 | -0.764 | -- | -- | 0.677 | 1.72 | 23.9 | 51 | -- | -- |
| 250.5 | 0.74 | 8.1 | -1.28 | -- | -- | -- | -- | 0.661 | -- | -- | -- | -- | -- |
| 187.35 | 0.64 | 8.08 | -- | 1.32 | -- | -- | -- | 0.779 | 1.8 | -- | -- | -- | -- |
| 272.72 | 0.772 | 8.04 | -- | -- | 1.17 | -- | -- | 0.935 | -- | 35.95 | 1031 | -- | -- |
| 293.74 | 0.8 | 8.07 | -- | -- | -- | -- | -- | 0.803 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.66 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 2 | 104.89 | temperature | 25 | 90 | < th | dose dependent | rect. | 10 | 21 |
| 7 | 105.53 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 20 |
| 26 | 106.82 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 31 | 107.12 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 36 | 107.19 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 39 | 107.28 | humidity | 50 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 60 | 107.54 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 80 | 107.65 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 83 | 107.73 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 91 | 107.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 94 | 107.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 11 |
| 101 | 108.05 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 105 | 108.06 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 112 | 108.09 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 9 |
| 122 | 108.29 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 123 | 108.30 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 126 | 108.31 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 128 | 108.34 | humidity | 50 | 14400 | < th | dose dependent | sin | 7 | NA |
| 138 | 108.40 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 157 | 108.42 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 166 | 108.48 | temperature | 25 | 270 | < th | dose dependent | sin | 13 | NA |
| 168 | 108.48 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 23 |
| 169 | 108.49 | temperature | 25 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 177 | 108.55 | temperature | 25 | 90 | < th | dose dependent | sin | 11 | NA |
| 195 | 108.73 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 202 | 108.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 16 |
| 208 | 108.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 15 |
| 228 | 108.89 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 232 | 108.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 239 | 108.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 246 | 108.96 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 250 | 108.98 | humidity | 50 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 284 | 109.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 286 | 109.13 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 308 | 109.15 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 350 | 109.30 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 16 |
| 397 | 109.49 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 400 | 109.50 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 17 |
| 489 | 109.83 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 494 | 109.85 | temperature | 15 | 90 | > th | dose dependent | sin | 10 | NA |
| 498 | 109.85 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 22 |
| 618 | 110.12 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 17 |
| 678 | 110.26 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 20 |
| 682 | 110.27 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 701 | 110.28 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 826 | 110.30 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 13 | NA |
| 827 | 110.30 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 837 | 110.31 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 870 | 110.37 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 890 | 110.42 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 941 | 110.50 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 951 | 110.53 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 12 | NA |
| 952 | 110.53 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 963 | 110.54 | wind | 3 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 967 | 110.55 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 985 | 110.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 9 |