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Os01g0264900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, unclassifiable transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0161) R2 : 0.00146
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0276 (0.0338) R2dN8 : 0.00188 R2N8 : 0.00146
σ : 0.303
deviance : 42.06
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.01 0.278 11 -0.768 0.15 0.314 -0.111 -1.11 -0.207 14.1 19.66 3894 -- --
35.89 0.281 11 -0.414 0.0152 0.447 0.267 -- -0.125 21.1 13.8 11655 -- --
35.05 0.276 11 -0.762 0.147 0.302 -- -1.08 -0.202 14.3 19.3 3971 -- --
35.85 0.279 11 -0.49 0.144 0.325 -- -- -0.132 14.8 16.71 4344 -- --
35.89 0.281 11 -0.499 -- 0.38 -- -0.511 -0.148 -- 19 4476 -- --
38.03 0.289 10.9 -0.335 0.127 -- -0.0363 -- -0.0621 14.6 -- -- -- --
38.03 0.289 10.9 -0.336 0.128 -- -- -- -0.0623 14.8 -- -- -- --
36.09 0.281 11 -0.42 -- 0.401 -- -- -0.125 -- 16.71 4344 -- --
40.34 0.297 10.9 -- 0.0635 0.228 -- -- -0.0549 15.3 16.71 4344 -- --
38.98 0.292 10.9 -0.342 -- -- -- -- -0.0655 -- -- -- -- --
41.01 0.3 10.9 -- 0.134 -- -- -- -0.0248 14.8 -- -- -- --
40.37 0.296 10.9 -- -- -0.2 -- -- 0.0524 -- 26 47206 -- --
42.06 0.303 10.9 -- -- -- -- -- -0.0276 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.74 radiation 10.0 43200 < th dose dependent rect. 20 8
4 33.01 atmosphere 1005.0 720 > th dose independent rect. 21 1
5 33.19 atmosphere 1005.0 270 > th dose independent rect. 12 19
7 33.32 atmosphere 1005.0 10 > th dose independent rect. 14 19
8 33.33 temperature 15.0 10 > th dose dependent rect. 9 19
17 33.41 atmosphere 1005.0 720 > th dose independent rect. 20 3
22 33.44 atmosphere 1005.0 30 > th dose independent rect. 12 21
32 33.54 humidity 90.0 4320 > th dose dependent rect. 6 1
36 33.57 temperature 10.0 270 > th dose dependent rect. 17 9
64 33.76 temperature 20.0 90 > th dose independent rect. 19 9
69 33.78 radiation 20.0 1440 < th dose independent rect. 11 1
72 33.79 temperature 20.0 10 > th dose independent rect. 20 9
85 33.86 atmosphere 1005.0 270 > th dose independent rect. 21 10
88 33.88 temperature 15.0 90 > th dose dependent rect. 19 9
98 33.95 radiation 20.0 1440 < th dose dependent rect. 11 1
104 33.96 atmosphere 995.0 10 > th dose dependent rect. 14 19
105 33.97 temperature 20.0 30 > th dose independent rect. 9 19
130 34.04 radiation 1.0 43200 < th dose dependent rect. 24 1
131 34.04 temperature 30.0 90 < th dose dependent rect. 15 17
133 34.05 temperature 25.0 4320 > th dose independent rect. 19 1
147 34.08 humidity 90.0 43200 > th dose dependent rect. 14 1
160 34.10 atmosphere 995.0 10 > th dose dependent rect. 12 21
161 34.11 wind 1.0 14400 > th dose independent rect. 23 4
170 34.13 temperature 25.0 4320 < th dose independent rect. 19 1
186 34.16 atmosphere 1000.0 43200 > th dose independent rect. 22 1
188 34.16 atmosphere 1000.0 43200 < th dose independent rect. 22 1
208 34.18 temperature 20.0 1440 > th dose independent rect. 24 7
209 34.18 temperature 20.0 1440 < th dose independent rect. 24 7
217 34.20 temperature 20.0 1440 < th dose independent rect. 1 2
223 34.21 atmosphere 995.0 43200 > th dose independent rect. 12 1
224 34.21 temperature 20.0 1440 > th dose independent rect. 24 3
251 34.24 wind 1.0 14400 > th dose independent rect. 19 10
271 34.26 radiation 20.0 4320 < th dose independent rect. 15 16
280 34.28 temperature 20.0 1440 > th dose independent rect. 5 2
284 34.28 temperature 20.0 4320 < th dose independent rect. 20 4
289 34.28 wind 1.0 4320 < th dose dependent rect. 6 1
317 34.32 atmosphere 1005.0 270 > th dose independent rect. 3 3
318 34.32 temperature 20.0 4320 > th dose independent rect. 20 4
324 34.33 humidity 80.0 43200 < th dose independent rect. 6 2
332 34.33 radiation 1.0 14400 > th dose independent rect. 18 12
340 34.34 atmosphere 995.0 43200 > th dose independent rect. 10 5
350 34.35 precipitation 0.1 14400 > th dose independent rect. 13 1
356 34.35 wind 1.0 14400 < th dose independent rect. 19 10
364 34.36 atmosphere 995.0 43200 < th dose independent rect. 13 2
375 34.36 atmosphere 995.0 43200 < th dose independent rect. 9 7
388 34.37 precipitation 0.1 14400 < th dose independent rect. 13 1
405 34.37 precipitation 0.1 14400 < th dose dependent rect. 13 1
407 34.37 temperature 15.0 10 > th dose dependent rect. 20 9
422 34.38 atmosphere 995.0 43200 < th dose dependent rect. 14 2
436 34.39 radiation 30.0 4320 > th dose dependent rect. 15 17
476 34.42 atmosphere 1005.0 10 > th dose independent rect. 23 10
497 34.43 temperature 30.0 270 < th dose independent rect. 2 15
507 34.43 temperature 25.0 270 > th dose dependent rect. 17 18
510 34.44 wind 1.0 14400 < th dose independent rect. 23 4
524 34.44 wind 1.0 90 < th dose independent rect. 7 21
534 34.45 radiation 10.0 1440 < th dose independent rect. 13 4
535 34.45 atmosphere 1005.0 270 > th dose independent rect. 2 5
547 34.45 temperature 30.0 10 < th dose dependent rect. 12 21
563 34.46 atmosphere 995.0 270 > th dose dependent rect. 11 20
566 34.47 temperature 20.0 1440 < th dose independent rect. 5 1
579 34.47 radiation 10.0 1440 < th dose independent rect. 11 8
583 34.47 radiation 10.0 1440 < th dose independent rect. 11 11
586 34.47 radiation 10.0 1440 < th dose independent rect. 11 16
588 34.47 atmosphere 1005.0 43200 < th dose dependent rect. 3 1
595 34.47 temperature 10.0 270 > th dose dependent rect. 16 22
619 34.48 temperature 25.0 270 > th dose dependent sin 10 NA
620 34.48 precipitation 0.1 43200 > th dose dependent rect. 20 2
625 34.48 wind 3.0 30 < th dose dependent rect. 7 21
626 34.49 humidity 90.0 43200 > th dose independent rect. 13 2
653 34.50 radiation 10.0 1440 < th dose independent sin 18 NA
671 34.50 wind 9.0 43200 > th dose dependent rect. 19 2
679 34.50 temperature 20.0 90 > th dose dependent rect. 19 19
684 34.51 temperature 10.0 43200 > th dose independent rect. 10 5
700 34.51 temperature 20.0 4320 > th dose dependent rect. 20 1
701 34.51 atmosphere 1000.0 43200 < th dose dependent rect. 20 1
705 34.51 atmosphere 1005.0 43200 < th dose dependent rect. 23 5
709 34.51 temperature 25.0 270 > th dose dependent rect. 18 16
734 34.52 atmosphere 1005.0 43200 < th dose dependent rect. 23 1
761 34.53 atmosphere 995.0 43200 < th dose independent rect. 16 6
785 34.54 wind 9.0 43200 < th dose independent rect. 20 1
808 34.54 atmosphere 1005.0 43200 < th dose dependent rect. 15 14
817 34.55 atmosphere 1005.0 720 < th dose independent rect. 19 6
845 34.55 atmosphere 995.0 43200 < th dose dependent rect. 16 6
900 34.57 atmosphere 1000.0 43200 > th dose independent rect. 2 1
901 34.57 atmosphere 1000.0 43200 < th dose independent rect. 2 1
909 34.57 atmosphere 1005.0 720 < th dose independent rect. 21 4
918 34.57 radiation 1.0 14400 < th dose independent rect. 18 12
921 34.57 atmosphere 1005.0 43200 < th dose dependent sin 13 NA
924 34.57 precipitation 0.1 14400 > th dose dependent rect. 13 1
971 34.58 wind 5.0 14400 < th dose dependent rect. 21 1