Os01g0264500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0264500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.05 | 0.216 | 11.8 | 0.192 | 0.433 | -1.34 | 0.212 | 1.2 | -0.204 | 22.7 | 16.1 | 603 | -- | -- |
| 22.05 | 0.219 | 11.8 | -0.00394 | 0.428 | -1.36 | 0.384 | -- | -0.263 | 22.4 | 14.91 | 592 | -- | -- |
| 21.22 | 0.215 | 11.8 | 0.209 | 0.427 | -1.33 | -- | 1.33 | -0.2 | 22.6 | 16.25 | 593 | -- | -- |
| 22.61 | 0.221 | 11.8 | -0.0321 | 0.429 | -1.38 | -- | -- | -0.267 | 22.6 | 14.8 | 593 | -- | -- |
| 26.77 | 0.241 | 11.8 | 0.142 | -- | -1.14 | -- | 1.37 | -0.236 | -- | 17.43 | 251 | -- | -- |
| 45.42 | 0.316 | 11.8 | -0.359 | 0.32 | -- | 0.308 | -- | -0.475 | 2.21 | -- | -- | -- | -- |
| 45.77 | 0.317 | 11.8 | -0.368 | 0.321 | -- | -- | -- | -0.477 | 2.31 | -- | -- | -- | -- |
| 27.55 | 0.244 | 11.8 | -0.0959 | -- | -1.28 | -- | -- | -0.298 | -- | 13.73 | 215 | -- | -- |
| 22.63 | 0.222 | 11.8 | -- | 0.43 | -1.39 | -- | -- | -0.259 | 22.6 | 14.9 | 598 | -- | -- |
| 51.89 | 0.337 | 11.8 | -0.355 | -- | -- | -- | -- | -0.469 | -- | -- | -- | -- | -- |
| 49.34 | 0.329 | 11.8 | -- | 0.314 | -- | -- | -- | -0.436 | 2.29 | -- | -- | -- | -- |
| 27.78 | 0.245 | 11.8 | -- | -- | -1.32 | -- | -- | -0.284 | -- | 13.64 | 215 | -- | -- |
| 55.2 | 0.347 | 11.8 | -- | -- | -- | -- | -- | -0.43 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.93 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 18 | 19.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 56 | 20.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 59 | 20.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 64 | 20.42 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 69 | 20.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 90 | 20.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 103 | 20.57 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 107 | 20.58 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 127 | 20.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 144 | 20.65 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 227 | 20.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 509 | 21.02 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 862 | 21.32 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 903 | 21.35 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |