Os01g0263300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a).
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Os01g0263300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.06 | 0.352 | 3.03 | 0.0678 | 0.073 | 0.965 | 0.204 | 2.44 | 0.0178 | 9.55 | 8.672 | 7 | -- | -- |
| 57.82 | 0.357 | 3.02 | 0.0479 | 0.0881 | 1.52 | 0.323 | -- | 0.0123 | 10.6 | 8.672 | 7 | -- | -- |
| 56.17 | 0.349 | 3.03 | 0.0754 | 0.0793 | 1 | -- | 2.51 | 0.019 | 8.12 | 8.655 | 6 | -- | -- |
| 58.17 | 0.358 | 3.02 | 0.0601 | 0.0975 | 1.56 | -- | -- | 0.0124 | 9 | 8.655 | 6 | -- | -- |
| 56.52 | 0.35 | 3.03 | 0.0753 | -- | 0.999 | -- | 2.56 | 0.0183 | -- | 8.641 | 6 | -- | -- |
| 60.09 | 0.363 | 3.02 | 0.0257 | 0.0831 | -- | 0.351 | -- | 0.00566 | 10.6 | -- | -- | -- | -- |
| 60.57 | 0.364 | 3.02 | 0.0389 | 0.0868 | -- | -- | -- | 0.00601 | 9.45 | -- | -- | -- | -- |
| 58.71 | 0.358 | 3.02 | 0.0594 | -- | 1.52 | -- | -- | 0.0129 | -- | 8.655 | 9 | -- | -- |
| 58.26 | 0.357 | 3.02 | -- | 0.0975 | 1.54 | -- | -- | 0.0057 | 8.96 | 8.7 | 2 | -- | -- |
| 61.01 | 0.365 | 3.02 | 0.0383 | -- | -- | -- | -- | 0.00629 | -- | -- | -- | -- | -- |
| 60.61 | 0.364 | 3.02 | -- | 0.0867 | -- | -- | -- | 0.00168 | 9.41 | -- | -- | -- | -- |
| 58.8 | 0.358 | 3.02 | -- | -- | 1.5 | -- | -- | 0.00624 | -- | 8.655 | 9 | -- | -- |
| 61.05 | 0.365 | 3.03 | -- | -- | -- | -- | -- | 0.00204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.71 | wind | 9.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 3 | 54.79 | wind | 7.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 25 | 55.01 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 26 | 55.01 | wind | 5.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 38 | 55.12 | wind | 5.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 39 | 55.13 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 40 | 55.13 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 41 | 55.15 | wind | 7.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 49 | 55.21 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 50 | 55.21 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 100 | 55.44 | wind | 9.0 | 90 | > th | dose independent | rect. | 18 | 17 |
| 110 | 55.48 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 182 | 55.74 | wind | 9.0 | 90 | > th | dose dependent | rect. | 18 | 17 |
| 250 | 55.93 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 252 | 55.93 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 302 | 56.11 | wind | 7.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 304 | 56.13 | wind | 7.0 | 90 | < th | dose independent | sin | 4 | NA |
| 319 | 56.15 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 19 |
| 353 | 56.20 | wind | 7.0 | 90 | > th | dose independent | sin | 5 | NA |
| 354 | 56.20 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 445 | 56.20 | wind | 7.0 | 10 | > th | dose dependent | rect. | 18 | 19 |
| 495 | 56.24 | wind | 9.0 | 90 | > th | dose independent | sin | 8 | NA |
| 521 | 56.27 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 18 |
| 542 | 56.30 | wind | 9.0 | 90 | < th | dose independent | sin | 8 | NA |
| 588 | 56.36 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 724 | 56.44 | wind | 9.0 | 10 | > th | dose independent | rect. | 11 | 8 |
| 796 | 56.51 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 836 | 56.56 | wind | 7.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 890 | 56.60 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 16 |