Os01g0261600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os01g0261600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 354.66 | 0.885 | 3.21 | -0.215 | 0.21 | 1.57 | -0.887 | -4.4 | -0.0208 | 17.4 | 93.99 | 340 | -- | -- |
| 363.99 | 0.889 | 3.2 | -0.279 | 0.195 | 2.02 | -0.0467 | -- | -0.0552 | 16.4 | 94.69 | 350 | -- | -- |
| 355.89 | 0.879 | 3.21 | -0.23 | 0.226 | 1.59 | -- | -3.72 | -0.0245 | 16.1 | 93.98 | 340 | -- | -- |
| 363.99 | 0.889 | 3.2 | -0.28 | 0.195 | 2.02 | -- | -- | -0.0558 | 16.5 | 94.69 | 350 | -- | -- |
| 358.23 | 0.882 | 3.21 | -0.22 | -- | 1.41 | -- | -3.67 | -0.0458 | -- | 94.04 | 347 | -- | -- |
| 385.1 | 0.92 | 3.22 | -0.286 | 0.141 | -- | -0.057 | -- | -0.162 | 10.5 | -- | -- | -- | -- |
| 385.11 | 0.919 | 3.22 | -0.289 | 0.142 | -- | -- | -- | -0.163 | 10.5 | -- | -- | -- | -- |
| 365.63 | 0.891 | 3.2 | -0.274 | -- | 1.9 | -- | -- | -0.0703 | -- | 94.79 | 356 | -- | -- |
| 366.03 | 0.891 | 3.2 | -- | 0.191 | 2.05 | -- | -- | -0.0286 | 16.3 | 94.73 | 350 | -- | -- |
| 386.34 | 0.918 | 3.22 | -0.291 | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
| 387.31 | 0.921 | 3.21 | -- | 0.144 | -- | -- | -- | -0.13 | 10.6 | -- | -- | -- | -- |
| 367.59 | 0.893 | 3.2 | -- | -- | 1.91 | -- | -- | -0.0483 | -- | 94.82 | 358 | -- | -- |
| 388.58 | 0.92 | 3.22 | -- | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 355.92 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 357.10 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 357.10 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 4 | 357.63 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 7 | 358.23 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 8 | 358.38 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 10 | 358.44 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 21 | 359.48 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 24 | 360.05 | wind | 1.0 | 30 | < th | dose independent | rect. | 3 | 2 |
| 31 | 360.22 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 47 | 360.79 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 104 | 362.54 | wind | 5.0 | 90 | > th | dose independent | rect. | 13 | 1 |
| 107 | 362.56 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 21 | 6 |
| 124 | 362.98 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 6 |
| 132 | 363.09 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 135 | 363.15 | humidity | 90.0 | 720 | > th | dose independent | rect. | 21 | 4 |
| 138 | 363.21 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 148 | 363.34 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 15 | 14 |
| 165 | 363.65 | atmosphere | 1005.0 | 270 | > th | dose independent | sin | 10 | NA |
| 167 | 363.66 | wind | 5.0 | 270 | > th | dose independent | rect. | 11 | 3 |
| 180 | 363.89 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 225 | 364.47 | wind | 5.0 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 230 | 364.52 | atmosphere | 1005.0 | 720 | > th | dose independent | sin | 13 | NA |
| 251 | 364.78 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 17 | 17 |
| 252 | 364.78 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 254 | 364.79 | atmosphere | 1005.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 281 | 365.12 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 23 | 2 |
| 322 | 365.53 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 16 | 13 |
| 335 | 365.67 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 338 | 365.71 | atmosphere | 1005.0 | 270 | < th | dose independent | sin | 9 | NA |
| 348 | 365.80 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 354 | 365.84 | humidity | 90.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 358 | 365.88 | humidity | 90.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 359 | 365.89 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 370 | 365.97 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 12 | 22 |
| 377 | 366.03 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 5 |
| 382 | 366.05 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 392 | 366.09 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 23 | 2 |
| 397 | 366.11 | atmosphere | 1005.0 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 439 | 366.37 | atmosphere | 1010.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 449 | 366.43 | atmosphere | 1010.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 488 | 366.65 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 17 | 19 |
| 491 | 366.69 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 495 | 366.69 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 19 | 14 |
| 497 | 366.70 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 501 | 366.71 | atmosphere | 1005.0 | 720 | < th | dose independent | sin | 13 | NA |
| 502 | 366.71 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 22 | 18 |
| 524 | 366.84 | atmosphere | 1005.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 547 | 366.94 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 552 | 366.96 | wind | 5.0 | 10 | > th | dose independent | rect. | 12 | 3 |
| 579 | 367.10 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 590 | 367.14 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 611 | 367.20 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 720 | 367.61 | temperature | 25.0 | 270 | > th | dose dependent | sin | 20 | NA |
| 734 | 367.67 | wind | 1.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 746 | 367.69 | atmosphere | 1010.0 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 779 | 367.83 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 16 | 18 |
| 793 | 367.89 | atmosphere | 1005.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 795 | 367.90 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 14 | 20 |
| 818 | 367.97 | atmosphere | 1010.0 | 720 | < th | dose dependent | rect. | 22 | 3 |
| 823 | 367.98 | atmosphere | 1005.0 | 30 | < th | dose independent | sin | 7 | NA |
| 832 | 367.99 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 19 | 15 |
| 851 | 368.07 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 869 | 368.14 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 875 | 368.14 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 930 | 368.25 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 23 |
| 981 | 368.37 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 985 | 368.39 | temperature | 25.0 | 90 | > th | dose dependent | sin | 16 | NA |