Os01g0261200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os01g0261200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.43 | 0.246 | 13 | 1.63 | 0.332 | 1.17 | 0.566 | -0.555 | 0.386 | 18.5 | 29.6 | 80 | -- | -- |
| 27.73 | 0.245 | 13 | 1.54 | 0.322 | 1.21 | 0.679 | -- | 0.374 | 18 | 29.35 | 60 | -- | -- |
| 28.18 | 0.247 | 13 | 1.63 | 0.326 | 1.14 | -- | -0.686 | 0.391 | 18.7 | 29.51 | 80 | -- | -- |
| 28.78 | 0.25 | 13 | 1.51 | 0.306 | 1.13 | -- | -- | 0.365 | 18.7 | 28.89 | 63 | -- | -- |
| 32.44 | 0.267 | 13 | 1.58 | -- | 0.999 | -- | -0.658 | 0.352 | -- | 29.51 | 80 | -- | -- |
| 46.37 | 0.319 | 13 | 1.23 | 0.345 | -- | -0.0488 | -- | 0.128 | 23.2 | -- | -- | -- | -- |
| 46.38 | 0.319 | 13 | 1.23 | 0.345 | -- | -- | -- | 0.128 | 23.2 | -- | -- | -- | -- |
| 32.76 | 0.268 | 13 | 1.47 | -- | 1.02 | -- | -- | 0.34 | -- | 27.93 | 4 | -- | -- |
| 82.66 | 0.426 | 13 | -- | 0.262 | 0.606 | -- | -- | 0.0618 | 21.6 | 34.9 | 6 | -- | -- |
| 53.82 | 0.343 | 13 | 1.24 | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
| 86.48 | 0.435 | 13.1 | -- | 0.357 | -- | -- | -- | -0.00951 | 23.4 | -- | -- | -- | -- |
| 86.37 | 0.434 | 13 | -- | -- | 0.614 | -- | -- | 0.104 | -- | 27.93 | 4 | -- | -- |
| 94.49 | 0.454 | 13 | -- | -- | -- | -- | -- | -0.00695 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.13 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 2 | 27.41 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 3 | 27.43 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 5 | 27.49 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 6 | 27.49 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 8 | 27.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 10 | 27.53 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 11 | 27.56 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 14 | 27.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 15 | 27.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 28 | 27.87 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 53 | 28.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 60 | 28.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 64 | 28.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 81 | 28.71 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 89 | 28.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 106 | 28.97 | temperature | 30 | 10 | < th | dose dependent | sin | 18 | NA |
| 112 | 29.02 | temperature | 25 | 10 | < th | dose dependent | sin | 20 | NA |
| 135 | 29.27 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 136 | 29.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 140 | 29.36 | temperature | 10 | 10 | > th | dose dependent | sin | 18 | NA |
| 141 | 29.36 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 143 | 29.38 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 149 | 29.43 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 208 | 29.82 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 209 | 29.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 19 |
| 255 | 30.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 16 |
| 316 | 30.26 | temperature | 10 | 720 | > th | dose dependent | sin | 0 | NA |
| 346 | 30.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 349 | 30.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 468 | 30.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 558 | 31.01 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 561 | 31.02 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 645 | 31.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 654 | 31.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 655 | 31.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 720 | 31.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 721 | 31.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 736 | 31.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 754 | 31.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 756 | 31.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 757 | 31.30 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 773 | 31.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 800 | 31.34 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 813 | 31.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 18 |
| 952 | 31.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 976 | 31.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |