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Os01g0258100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, uncharacterized transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.81 (0.0305) R2 : 0.123
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.596 (0.0778) R2dC : 0.113 R2C : 0.107
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.163 (0.0643) R2dN8 : 0.0159 R2N8 : 0.0103
σ : 0.576
deviance : 151.77
__
_____
C
peak time of C : 15.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
128.48 0.533 5.83 -0.674 0.514 -0.59 -0.212 -0.271 0.1 19.7 17.63 10 -- --
128.79 0.529 5.83 -0.667 0.516 -0.607 -0.383 -- 0.105 19.8 17.6 10 -- --
128.59 0.528 5.83 -0.67 0.513 -0.589 -- -0.333 0.0994 19.7 17.6 10 -- --
129.21 0.529 5.83 -0.656 0.514 -0.592 -- -- 0.101 19.6 17.63 10 -- --
141.19 0.553 5.82 -0.672 -- -0.465 -- -0.331 0.0933 -- 18.12 9 -- --
141.3 0.557 5.82 -0.623 0.579 -- 0.383 -- 0.0918 15.7 -- -- -- --
141.71 0.557 5.82 -0.618 0.584 -- -- -- 0.094 15.9 -- -- -- --
141.46 0.554 5.82 -0.657 -- -0.469 -- -- 0.104 -- 17.09 6 -- --
140.5 0.552 5.81 -- 0.511 -0.562 -- -- 0.173 19.4 17.6 10 -- --
160.4 0.592 5.82 -0.642 -- -- -- -- 0.0785 -- -- -- -- --
151.77 0.576 5.81 -- 0.596 -- -- -- 0.163 15.9 -- -- -- --
152.94 0.576 5.8 -- -- -0.464 -- -- 0.175 -- 17.7 6 -- --
171.26 0.611 5.81 -- -- -- -- -- 0.15 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 124.13 temperature 10.0 270 > th dose dependent rect. 18 18
2 124.19 temperature 10.0 270 > th dose dependent rect. 19 16
4 124.35 wind 1.0 270 > th dose independent rect. 1 16
5 124.44 temperature 10.0 270 > th dose dependent rect. 18 7
10 124.94 wind 9.0 270 < th dose dependent rect. 6 7
15 125.34 temperature 15.0 270 > th dose independent rect. 6 7
21 125.60 temperature 30.0 270 < th dose dependent rect. 23 7
23 125.61 wind 1.0 270 > th dose independent rect. 13 17
28 125.75 wind 9.0 90 < th dose dependent rect. 9 16
29 125.77 wind 9.0 270 < th dose dependent rect. 7 16
32 125.84 radiation 20.0 10 < th dose independent rect. 3 15
36 125.92 humidity 60.0 270 > th dose independent rect. 17 8
40 126.01 wind 7.0 270 < th dose independent rect. 6 7
43 126.02 radiation 20.0 10 < th dose independent rect. 1 17
46 126.12 precipitation 0.1 270 < th dose independent rect. 6 7
47 126.12 precipitation 0.1 270 < th dose dependent rect. 6 7
49 126.13 radiation 30.0 10 < th dose dependent rect. 3 15
50 126.16 radiation 20.0 270 < th dose dependent rect. 17 8
53 126.19 radiation 10.0 270 < th dose independent rect. 17 8
55 126.20 atmosphere 995.0 270 > th dose independent rect. 6 7
56 126.20 atmosphere 1015.0 270 < th dose independent rect. 6 7
57 126.20 temperature 10.0 270 > th dose independent rect. 13 17
58 126.20 precipitation 0.1 270 < th dose independent rect. 13 17
60 126.20 precipitation 0.1 270 < th dose dependent rect. 13 17
61 126.21 precipitation 0.1 270 < th dose independent rect. 1 16
62 126.21 precipitation 0.1 270 < th dose dependent rect. 1 16
67 126.25 wind 9.0 270 < th dose independent rect. 17 8
73 126.32 temperature 30.0 270 < th dose independent rect. 17 8
75 126.36 radiation 1.0 270 > th dose independent rect. 5 8
76 126.36 wind 5.0 90 < th dose independent rect. 9 16
77 126.37 temperature 10.0 270 > th dose independent rect. 17 8
81 126.37 temperature 10.0 270 > th dose independent rect. 1 16
82 126.37 atmosphere 1015.0 270 < th dose independent rect. 1 16
93 126.41 precipitation 0.1 270 < th dose independent rect. 17 8
94 126.41 precipitation 0.1 270 < th dose dependent rect. 17 8
95 126.42 atmosphere 995.0 270 > th dose independent rect. 13 17
99 126.45 wind 9.0 270 < th dose independent rect. 13 17
102 126.47 radiation 20.0 10 < th dose dependent sin 2 NA
111 126.57 humidity 50.0 270 > th dose independent rect. 6 7
112 126.58 wind 9.0 270 < th dose independent rect. 1 16
115 126.61 radiation 10.0 30 > th dose independent rect. 9 5
127 126.72 humidity 90.0 10 < th dose independent rect. 9 6
128 126.72 atmosphere 995.0 270 > th dose independent rect. 1 16
129 126.72 radiation 40.0 270 < th dose dependent rect. 23 10
149 126.88 radiation 30.0 10 < th dose dependent rect. 1 17
151 126.88 radiation 40.0 10 < th dose dependent rect. 14 19
155 126.92 temperature 25.0 270 < th dose independent rect. 23 7
197 127.09 radiation 30.0 90 < th dose independent rect. 1 8
200 127.10 humidity 50.0 270 > th dose independent rect. 6 19
205 127.12 wind 1.0 270 > th dose independent rect. 23 8
208 127.13 atmosphere 995.0 270 > th dose independent rect. 17 8
211 127.14 temperature 25.0 270 < th dose independent rect. 1 5
231 127.22 radiation 40.0 90 < th dose independent rect. 3 15
242 127.24 temperature 15.0 90 > th dose independent rect. 9 16
264 127.30 precipitation 0.1 90 < th dose independent rect. 1 8
265 127.30 precipitation 0.1 90 < th dose dependent rect. 1 8
267 127.31 atmosphere 1015.0 270 < th dose independent rect. 18 7
277 127.33 temperature 30.0 90 < th dose independent rect. 1 8
292 127.41 radiation 30.0 270 < th dose independent rect. 23 10
307 127.47 humidity 60.0 90 > th dose independent rect. 1 8
308 127.48 wind 7.0 90 < th dose independent rect. 1 8
310 127.48 humidity 50.0 270 > th dose independent rect. 7 17
314 127.50 wind 1.0 270 > th dose independent rect. 12 6
317 127.51 radiation 40.0 90 < th dose independent rect. 1 17
337 127.54 wind 9.0 90 < th dose dependent rect. 9 6
349 127.59 temperature 10.0 90 > th dose independent rect. 1 8
352 127.59 atmosphere 995.0 90 > th dose independent rect. 1 8
353 127.59 atmosphere 1015.0 90 < th dose independent rect. 1 8
356 127.59 temperature 10.0 270 > th dose dependent rect. 6 6
365 127.62 wind 1.0 270 > th dose independent rect. 1 5
369 127.63 precipitation 0.1 270 < th dose independent rect. 23 8
370 127.63 precipitation 0.1 270 < th dose dependent rect. 23 8
387 127.66 temperature 15.0 270 > th dose independent rect. 7 16
393 127.69 atmosphere 1015.0 90 < th dose independent rect. 9 16
397 127.70 radiation 10.0 270 < th dose dependent rect. 1 13
398 127.70 wind 9.0 270 < th dose dependent rect. 18 18
402 127.73 wind 5.0 270 < th dose independent rect. 7 17
409 127.75 wind 9.0 270 < th dose dependent rect. 17 8
425 127.81 radiation 20.0 270 < th dose independent rect. 23 8
426 127.81 radiation 10.0 270 < th dose dependent rect. 1 6
432 127.82 temperature 10.0 1440 > th dose independent rect. 2 8
435 127.82 atmosphere 995.0 1440 > th dose independent rect. 2 8
438 127.82 temperature 10.0 1440 > th dose independent rect. 10 16
443 127.83 wind 7.0 270 < th dose independent rect. 18 18
453 127.84 radiation 40.0 10 < th dose dependent rect. 12 21
454 127.85 humidity 70.0 270 > th dose independent rect. 23 8
467 127.90 wind 9.0 270 < th dose independent rect. 23 8
487 127.91 temperature 10.0 270 > th dose independent rect. 23 8
489 127.91 humidity 50.0 270 > th dose independent rect. 23 8
491 127.91 atmosphere 995.0 270 > th dose independent rect. 23 8
512 127.94 precipitation 0.1 10 < th dose independent rect. 9 16
517 127.94 precipitation 0.1 10 < th dose dependent rect. 9 16
531 127.97 temperature 10.0 30 > th dose dependent rect. 9 5
536 127.98 radiation 30.0 10 < th dose independent rect. 14 19
552 128.02 precipitation 0.1 270 < th dose independent rect. 1 5
556 128.02 atmosphere 1015.0 270 < th dose independent rect. 7 16
558 128.02 precipitation 0.1 270 < th dose dependent rect. 1 5
600 128.07 wind 9.0 270 < th dose independent rect. 6 19
619 128.11 temperature 20.0 270 > th dose independent rect. 18 18
621 128.12 wind 7.0 270 < th dose independent rect. 1 5
623 128.12 wind 1.0 270 > th dose independent rect. 17 8
636 128.14 temperature 10.0 10 > th dose dependent rect. 9 16
653 128.16 radiation 20.0 10 < th dose independent rect. 1 19
656 128.17 temperature 10.0 270 > th dose independent rect. 1 5
659 128.17 humidity 50.0 270 > th dose independent rect. 1 5
662 128.17 atmosphere 995.0 270 > th dose independent rect. 1 5
663 128.17 atmosphere 1015.0 270 < th dose independent rect. 1 5
668 128.17 wind 9.0 10 < th dose independent rect. 9 6
671 128.17 temperature 10.0 270 > th dose independent rect. 6 19
699 128.20 humidity 50.0 90 > th dose dependent rect. 1 8
706 128.22 precipitation 0.1 270 < th dose independent rect. 7 16
707 128.22 temperature 20.0 90 > th dose independent rect. 21 17
709 128.22 precipitation 0.1 270 < th dose dependent rect. 7 16
768 128.35 atmosphere 1015.0 270 < th dose independent rect. 6 19
799 128.39 precipitation 0.1 270 < th dose independent rect. 6 19
801 128.39 precipitation 0.1 270 < th dose dependent rect. 6 19
823 128.43 humidity 50.0 270 > th dose dependent rect. 1 5
830 128.44 radiation 40.0 90 < th dose independent rect. 15 16
839 128.45 atmosphere 995.0 30 > th dose independent rect. 9 16
844 128.46 temperature 10.0 270 > th dose independent rect. 12 6
846 128.46 atmosphere 1015.0 270 < th dose independent rect. 12 6
853 128.46 temperature 10.0 270 > th dose independent rect. 18 18
854 128.46 wind 1.0 270 > th dose dependent rect. 12 6
858 128.47 temperature 10.0 10 > th dose independent rect. 9 6
860 128.47 atmosphere 995.0 10 > th dose independent rect. 9 6
861 128.47 atmosphere 1015.0 10 < th dose independent rect. 9 6
862 128.47 precipitation 0.1 10 < th dose independent rect. 9 6
864 128.47 temperature 10.0 10 > th dose independent rect. 15 18
865 128.47 precipitation 0.1 10 < th dose dependent rect. 9 6
903 128.50 precipitation 0.1 30 < th dose independent rect. 14 19
907 128.50 precipitation 0.1 30 < th dose dependent rect. 14 19
931 128.54 wind 9.0 270 < th dose independent rect. 12 6
944 128.55 temperature 10.0 1440 > th dose independent rect. 10 5
958 128.55 temperature 10.0 1440 > th dose independent rect. 15 19
976 128.57 wind 9.0 10 < th dose independent rect. 15 18