Os01g0256800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0256800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.9 | 0.358 | 7.41 | -0.976 | 0.174 | 1.26 | 0.311 | 0.487 | -0.197 | 9.96 | 19.4 | 1453 | -- | -- |
| 58.06 | 0.355 | 7.42 | -1.1 | 0.189 | 1.27 | 0.364 | -- | -0.231 | 10.5 | 20 | 1390 | -- | -- |
| 58.08 | 0.355 | 7.4 | -0.94 | 0.183 | 1.25 | -- | 0.567 | -0.189 | 8.43 | 19.45 | 1535 | -- | -- |
| 58.29 | 0.356 | 7.42 | -1.1 | 0.185 | 1.25 | -- | -- | -0.233 | 8.32 | 20.06 | 1536 | -- | -- |
| 59.94 | 0.361 | 7.41 | -0.959 | -- | 1.26 | -- | 0.532 | -0.191 | -- | 19.4 | 1507 | -- | -- |
| 106.85 | 0.485 | 7.36 | -0.629 | 0.18 | -- | 0.137 | -- | 0.0653 | 7.86 | -- | -- | -- | -- |
| 106.89 | 0.484 | 7.36 | -0.626 | 0.182 | -- | -- | -- | 0.0647 | 7.53 | -- | -- | -- | -- |
| 60.16 | 0.361 | 7.42 | -1.09 | -- | 1.24 | -- | -- | -0.226 | -- | 20.01 | 1500 | -- | -- |
| 85.66 | 0.431 | 7.37 | -- | 0.311 | 0.982 | -- | -- | -0.0368 | 8.31 | 21.9 | 2016 | -- | -- |
| 108.65 | 0.487 | 7.36 | -0.624 | -- | -- | -- | -- | 0.0676 | -- | -- | -- | -- | -- |
| 117.23 | 0.506 | 7.34 | -- | 0.177 | -- | -- | -- | 0.135 | 7.77 | -- | -- | -- | -- |
| 87.32 | 0.435 | 7.38 | -- | -- | 0.891 | -- | -- | -0.0377 | -- | 21.7 | 1469 | -- | -- |
| 118.92 | 0.509 | 7.34 | -- | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 2 | 55.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 4 | 55.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 5 | 55.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 16 |
| 23 | 56.13 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 24 | 56.15 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 30 | 56.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 34 | 56.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 36 | 56.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 51 | 56.37 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 58 | 56.42 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 63 | 56.44 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 5 |
| 79 | 56.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 272 | 57.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 16 |
| 594 | 57.71 | temperature | 10 | 4320 | > th | dose dependent | sin | 13 | NA |
| 735 | 57.94 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 763 | 57.97 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 839 | 58.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 844 | 58.08 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 854 | 58.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 906 | 58.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |