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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0255100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Soluble epoxide hydrolase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.09 (0.0401) R2 : 0.547
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.13 (0.101) R2dC : 0.118 R2C : 0.217
β3 : 2.72 (0.159) R2dE : 0.336 R2E : 0.428
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0598 (0.0869) R2dN8 : 0.000831 R2N8 : -0.00563
σ : 0.747
deviance : 257.13
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_____
C
peak time of C : 14.4
E
wheather : temperature
threshold : 21.12
memory length : 13
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 12
open length of G : 19

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
249.09 0.742 4.11 0.194 1.11 2.75 0.455 -1.95 -0.113 14.5 21.09 12 12 19
252.61 0.74 4.09 0.452 1.2 2.57 0.226 -- -0.0471 14.2 20.75 13 12 18.9
249.64 0.736 4.11 0.236 1.1 2.77 -- -1.7 -0.108 14.6 21.19 13 12 19
251.58 0.739 4.08 0.486 1.14 2.62 -- -- -0.0228 14.5 21 12 12 19
285.03 0.786 4.12 0.157 -- 3.77 -- -3.42 -0.0891 -- 23.84 12 11.9 19.6
371.44 0.904 4 0.839 1.78 -- 0.689 -- 0.432 16.3 -- -- -- --
372.75 0.904 4 0.846 1.78 -- -- -- 0.436 16.2 -- -- -- --
289.52 0.792 4.07 0.355 -- 3.59 -- -- 0.0231 -- 23.43 13 11.9 19
257.13 0.747 4.09 -- 1.13 2.72 -- -- -0.0598 14.4 21.12 13 12 19
544.75 1.09 3.99 0.775 -- -- -- -- 0.388 -- -- -- -- --
391.62 0.926 4.02 -- 1.77 -- -- -- 0.341 16.2 -- -- -- --
292.82 0.797 4.08 -- -- 3.6 -- -- -0.00872 -- 23.43 12 11.9 19
560.58 1.11 4.01 -- -- -- -- -- 0.302 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 251.25 temperature 20.0 10 > th dose dependent rect. 12 19
5 256.49 temperature 20.0 10 > th dose dependent rect. 12 17
7 256.73 temperature 15.0 90 > th dose dependent rect. 12 16
27 261.79 temperature 20.0 10 > th dose dependent rect. 12 8
31 262.04 temperature 20.0 270 > th dose dependent rect. 10 6
36 263.25 temperature 30.0 270 < th dose independent rect. 14 21
40 263.51 temperature 10.0 270 > th dose dependent rect. 10 17
48 265.11 temperature 20.0 270 > th dose dependent rect. 11 4
53 265.81 temperature 20.0 90 > th dose dependent rect. 12 6
60 266.43 radiation 1.0 30 > th dose independent rect. 12 7
82 267.95 temperature 10.0 270 > th dose dependent rect. 9 22
98 268.67 temperature 20.0 10 > th dose dependent rect. 12 10
103 269.18 temperature 25.0 90 > th dose independent rect. 12 6
120 270.33 temperature 20.0 270 > th dose dependent rect. 12 2
142 271.15 temperature 10.0 270 > th dose dependent rect. 23 17
156 272.34 temperature 25.0 10 > th dose dependent rect. 12 13
195 273.45 humidity 50.0 270 > th dose independent rect. 15 20
227 274.96 temperature 25.0 270 > th dose independent rect. 12 2
230 275.11 temperature 25.0 270 > th dose independent rect. 11 4
235 275.33 humidity 80.0 270 < th dose independent rect. 11 4
239 275.54 humidity 80.0 270 < th dose independent rect. 12 2
240 275.54 humidity 90.0 10 < th dose dependent rect. 12 8
255 276.27 temperature 25.0 270 > th dose independent rect. 10 6
288 277.88 temperature 25.0 10 > th dose independent rect. 12 8
389 280.32 humidity 50.0 270 > th dose independent rect. 16 18
421 280.86 humidity 90.0 270 < th dose dependent rect. 12 2
438 281.65 humidity 90.0 90 < th dose dependent rect. 12 5
460 282.16 humidity 80.0 10 < th dose dependent rect. 12 16
513 283.29 atmosphere 1010.0 270 < th dose independent rect. 11 4
530 283.65 radiation 10.0 270 > th dose independent rect. 12 2
553 284.15 radiation 1.0 90 > th dose dependent rect. 12 18
562 284.45 radiation 1.0 90 > th dose dependent rect. 12 7
607 285.09 radiation 1.0 270 > th dose independent rect. 10 9
633 285.41 temperature 30.0 270 < th dose independent rect. 5 16
650 285.71 temperature 25.0 10 > th dose dependent sin 18 NA
682 286.29 radiation 1.0 270 > th dose independent rect. 10 7
727 286.81 temperature 30.0 270 < th dose independent rect. 15 8
733 286.95 atmosphere 1010.0 270 < th dose independent rect. 10 6
895 290.14 humidity 50.0 270 > th dose independent rect. 12 2
932 290.52 atmosphere 995.0 270 > th dose independent rect. 15 20
933 290.53 temperature 30.0 270 < th dose dependent rect. 5 16
935 290.60 precipitation 0.1 270 < th dose independent rect. 12 2
936 290.60 precipitation 0.1 270 < th dose dependent rect. 12 2
947 290.77 humidity 50.0 270 > th dose independent rect. 15 8
950 290.81 humidity 50.0 270 > th dose independent rect. 11 4
970 291.37 temperature 10.0 270 > th dose independent rect. 12 2
972 291.37 atmosphere 995.0 270 > th dose independent rect. 12 2
974 291.37 temperature 10.0 270 > th dose independent rect. 14 22
979 291.42 precipitation 0.1 270 < th dose independent rect. 11 4
981 291.42 precipitation 0.1 270 < th dose dependent rect. 11 4