Os01g0253200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os01g0253200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 382.93 | 0.919 | 3.21 | 0.985 | 0.338 | -0.526 | 1.67 | -2.59 | -0.202 | 8.31 | 90.66 | 790 | -- | -- |
| 393.74 | 0.924 | 3.19 | 0.77 | 0.168 | -0.57 | 0.496 | -- | -0.227 | 7.71 | 90.44 | 1080 | -- | -- |
| 387.59 | 0.917 | 3.21 | 0.972 | 0.181 | -0.579 | -- | -1.98 | -0.215 | 8.41 | 90.14 | 1081 | -- | -- |
| 394.23 | 0.925 | 3.2 | 0.783 | 0.175 | -0.586 | -- | -- | -0.238 | 8.1 | 90.34 | 1080 | -- | -- |
| 389.3 | 0.919 | 3.21 | 0.965 | -- | -0.5 | -- | -1.89 | -0.204 | -- | 90.36 | 1117 | -- | -- |
| 399.63 | 0.937 | 3.18 | 0.697 | 0.148 | -- | 0.26 | -- | -0.145 | 5.94 | -- | -- | -- | -- |
| 399.75 | 0.936 | 3.18 | 0.699 | 0.152 | -- | -- | -- | -0.147 | 5.29 | -- | -- | -- | -- |
| 395.76 | 0.927 | 3.2 | 0.779 | -- | -0.525 | -- | -- | -0.227 | -- | 90.28 | 1107 | -- | -- |
| 409.94 | 0.943 | 3.21 | -- | 0.162 | -0.438 | -- | -- | -0.297 | 7.93 | 90 | 1067 | -- | -- |
| 400.96 | 0.936 | 3.18 | 0.704 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 412.62 | 0.95 | 3.19 | -- | 0.164 | -- | -- | -- | -0.224 | 5.13 | -- | -- | -- | -- |
| 411.32 | 0.945 | 3.21 | -- | -- | -0.376 | -- | -- | -0.287 | -- | 90.18 | 1088 | -- | -- |
| 414.03 | 0.95 | 3.2 | -- | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 373.42 | humidity | 90.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 2 | 373.76 | radiation | 20.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 3 | 374.18 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 11 | 2 |
| 4 | 374.39 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 5 | 374.39 | radiation | 10.0 | 10 | < th | dose independent | rect. | 10 | 6 |
| 7 | 374.44 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 14 | 374.59 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 16 | 374.59 | wind | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 31 | 374.72 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 43 | 375.66 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 6 |
| 50 | 376.36 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 6 |
| 51 | 376.38 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 60 | 376.71 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 61 | 376.73 | humidity | 80.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 74 | 377.08 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 24 | 7 |
| 86 | 377.54 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 97 | 378.00 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 104 | 378.25 | radiation | 10.0 | 270 | < th | dose independent | rect. | 10 | 20 |
| 105 | 378.31 | radiation | 10.0 | 10 | < th | dose independent | rect. | 19 | 21 |
| 113 | 378.72 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 155 | 378.91 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 12 |
| 171 | 379.67 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 11 |
| 184 | 380.03 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 186 | 380.09 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 191 | 380.09 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 208 | 380.33 | humidity | 90.0 | 720 | < th | dose independent | rect. | 1 | 5 |
| 221 | 380.56 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 4 |
| 235 | 380.81 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 236 | 380.82 | temperature | 30.0 | 90 | < th | dose independent | rect. | 12 | 19 |
| 245 | 381.06 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 250 | 381.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 255 | 381.16 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 258 | 381.19 | humidity | 60.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 269 | 381.35 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 13 | 10 |
| 270 | 381.36 | temperature | 30.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 288 | 381.60 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 296 | 381.60 | humidity | 90.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 298 | 381.62 | temperature | 30.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 300 | 381.63 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 302 | 381.64 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 24 | 1 |
| 307 | 381.68 | humidity | 90.0 | 720 | > th | dose independent | rect. | 24 | 7 |
| 328 | 381.96 | radiation | 10.0 | 10 | < th | dose independent | rect. | 9 | 22 |
| 332 | 382.01 | radiation | 10.0 | 10 | < th | dose independent | sin | 0 | NA |
| 334 | 382.02 | humidity | 90.0 | 720 | > th | dose independent | rect. | 24 | 5 |
| 338 | 382.04 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 10 | 20 |
| 357 | 382.19 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 364 | 382.19 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 374 | 382.26 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 384 | 382.31 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 387 | 382.33 | humidity | 80.0 | 90 | < th | dose independent | rect. | 24 | 7 |
| 395 | 382.37 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 402 | 382.42 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 19 | 21 |
| 410 | 382.49 | wind | 3.0 | 30 | < th | dose independent | rect. | 13 | 11 |
| 415 | 382.51 | humidity | 90.0 | 720 | > th | dose independent | sin | 10 | NA |
| 418 | 382.54 | humidity | 90.0 | 720 | > th | dose independent | rect. | 24 | 21 |
| 425 | 382.58 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 13 |
| 426 | 382.58 | humidity | 60.0 | 90 | > th | dose independent | rect. | 12 | 19 |
| 427 | 382.58 | humidity | 90.0 | 720 | < th | dose independent | rect. | 18 | 19 |
| 431 | 382.60 | wind | 3.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 437 | 382.65 | radiation | 10.0 | 10 | < th | dose independent | rect. | 24 | 16 |
| 443 | 382.72 | wind | 5.0 | 30 | < th | dose dependent | rect. | 12 | 12 |
| 444 | 382.74 | humidity | 60.0 | 90 | > th | dose independent | rect. | 12 | 4 |
| 464 | 382.88 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 11 |
| 465 | 382.88 | humidity | 90.0 | 720 | > th | dose independent | rect. | 16 | 15 |
| 468 | 382.91 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 8 |
| 470 | 382.91 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 471 | 382.92 | wind | 3.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 476 | 382.97 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 11 |
| 481 | 383.01 | temperature | 25.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 488 | 383.03 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 15 |
| 491 | 383.04 | humidity | 90.0 | 720 | > th | dose independent | rect. | 16 | 19 |
| 503 | 383.12 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 510 | 383.13 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 8 |
| 535 | 383.20 | wind | 3.0 | 30 | < th | dose dependent | rect. | 9 | 15 |
| 542 | 383.24 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 558 | 383.30 | temperature | 30.0 | 90 | < th | dose independent | rect. | 12 | 11 |
| 580 | 383.36 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 9 |
| 584 | 383.36 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 638 | 383.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 640 | 383.55 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 13 | 9 |
| 658 | 383.61 | humidity | 90.0 | 720 | < th | dose independent | sin | 9 | NA |
| 660 | 383.62 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 10 | 4 |
| 673 | 383.66 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 12 | 9 |
| 793 | 383.95 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 794 | 383.95 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 23 |
| 798 | 383.96 | humidity | 90.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 799 | 383.96 | humidity | 90.0 | 720 | > th | dose independent | rect. | 24 | 12 |
| 819 | 384.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 823 | 384.02 | radiation | 10.0 | 270 | < th | dose independent | rect. | 23 | 20 |
| 831 | 384.04 | wind | 3.0 | 10 | < th | dose dependent | rect. | 13 | 8 |
| 843 | 384.08 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 17 |
| 865 | 384.14 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 13 | 4 |
| 883 | 384.21 | humidity | 90.0 | 720 | > th | dose independent | rect. | 6 | 23 |
| 884 | 384.22 | radiation | 10.0 | 90 | < th | dose independent | sin | 1 | NA |
| 927 | 384.32 | radiation | 10.0 | 270 | < th | dose independent | rect. | 22 | 22 |
| 929 | 384.33 | humidity | 90.0 | 720 | > th | dose independent | no | NA | NA |
| 959 | 384.40 | radiation | 40.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 1000 | 384.40 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 20 | 3 |