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Os01g0253100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Avr9/Cf-9 induced kinase 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0137) R2 : 0.0876
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.19 (0.0288) R2dN8 : 0.113 R2N8 : 0.0876
σ : 0.257
deviance : 30.38
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
7 0.124 10.6 0.525 0.467 -0.272 -0.00591 -0.399 0.248 5.63 3.036 79 -- --
7.33 0.126 10.6 0.514 0.471 -0.242 0.0502 -- 0.246 5.51 3.049 81 -- --
7 0.123 10.6 0.525 0.467 -0.272 -- -0.398 0.248 5.63 3.11 79 -- --
7.33 0.126 10.6 0.514 0.471 -0.245 -- -- 0.246 5.54 2.88 80 -- --
12.9 0.167 10.6 0.554 -- -0.526 -- -0.147 0.29 -- -6.083e-05 420 -- --
8.08 0.133 10.6 0.515 0.525 -- 0.12 -- 0.236 4.58 -- -- -- --
8.12 0.133 10.6 0.514 0.526 -- -- -- 0.236 4.61 -- -- -- --
12.94 0.168 10.6 0.55 -- -0.532 -- -- 0.288 -- -13.4 424 -- --
14.31 0.176 10.6 -- 0.482 -0.247 -- -- 0.188 5.49 2.969 72 -- --
22.84 0.223 10.6 0.534 -- -- -- -- 0.25 -- -- -- -- --
15.09 0.182 10.7 -- 0.535 -- -- -- 0.179 4.58 -- -- -- --
20.89 0.213 10.6 -- -- -0.519 -- -- 0.225 -- -16.69 418 -- --
30.38 0.257 10.7 -- -- -- -- -- 0.19 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 6.17 temperature 15.0 270 > th dose independent rect. 6 21
2 6.17 precipitation 0.1 270 < th dose independent rect. 6 21
3 6.17 precipitation 0.1 270 < th dose dependent rect. 6 21
4 6.19 wind 9.0 270 < th dose dependent rect. 3 3
6 6.21 precipitation 0.1 270 < th dose independent rect. 3 3
7 6.21 precipitation 0.1 270 < th dose dependent rect. 3 3
8 6.22 temperature 15.0 270 > th dose independent rect. 7 19
9 6.23 wind 7.0 270 < th dose independent rect. 3 3
11 6.23 temperature 10.0 270 > th dose independent rect. 3 3
13 6.23 temperature 30.0 270 < th dose independent rect. 3 3
14 6.23 humidity 50.0 270 > th dose independent rect. 3 3
17 6.23 atmosphere 995.0 270 > th dose independent rect. 3 3
18 6.23 atmosphere 1015.0 270 < th dose independent rect. 3 3
19 6.23 radiation 20.0 270 < th dose independent rect. 3 3
22 6.23 temperature 15.0 270 > th dose independent rect. 8 17
25 6.25 temperature 15.0 270 > th dose independent rect. 6 9
26 6.25 radiation 1.0 270 > th dose independent rect. 6 9
27 6.25 temperature 15.0 270 > th dose independent rect. 21 14
28 6.25 wind 9.0 270 < th dose independent rect. 15 15
29 6.25 radiation 30.0 270 < th dose dependent rect. 3 3
37 6.28 temperature 15.0 270 > th dose independent rect. 21 16
38 6.28 precipitation 0.1 270 < th dose independent rect. 7 19
39 6.28 humidity 50.0 270 > th dose dependent rect. 3 3
40 6.28 radiation 30.0 270 < th dose dependent rect. 2 7
41 6.28 radiation 1.0 270 < th dose dependent rect. 3 16
42 6.28 precipitation 0.1 270 < th dose dependent rect. 7 19
44 6.29 wind 9.0 270 < th dose independent rect. 11 10
46 6.29 radiation 40.0 270 < th dose independent rect. 14 16
49 6.29 radiation 40.0 30 < th dose dependent rect. 4 19
51 6.30 precipitation 0.1 270 < th dose independent rect. 6 9
56 6.30 precipitation 0.1 270 < th dose dependent rect. 6 9
57 6.30 radiation 1.0 270 < th dose dependent rect. 3 10
62 6.31 humidity 50.0 270 > th dose independent rect. 21 14
68 6.31 radiation 1.0 270 < th dose dependent rect. 3 8
71 6.32 precipitation 0.1 270 < th dose independent rect. 2 5
72 6.32 wind 9.0 270 < th dose independent rect. 6 9
74 6.32 atmosphere 1015.0 270 < th dose independent rect. 6 9
75 6.32 radiation 1.0 270 < th dose independent rect. 3 10
77 6.32 temperature 10.0 270 > th dose independent rect. 15 15
79 6.32 precipitation 0.1 270 < th dose dependent rect. 2 5
83 6.33 wind 7.0 270 < th dose independent rect. 2 5
85 6.33 temperature 10.0 270 > th dose independent rect. 2 5
87 6.33 temperature 30.0 270 < th dose independent rect. 2 5
88 6.33 humidity 50.0 270 > th dose independent rect. 2 5
90 6.33 atmosphere 995.0 270 > th dose independent rect. 2 5
91 6.33 atmosphere 1010.0 270 < th dose independent rect. 2 5
93 6.33 radiation 30.0 270 < th dose independent rect. 2 5
95 6.33 wind 9.0 270 < th dose independent rect. 13 8
96 6.33 radiation 1.0 270 < th dose independent rect. 3 8
98 6.33 precipitation 0.1 270 < th dose independent rect. 8 17
100 6.33 wind 9.0 270 < th dose dependent rect. 2 5
105 6.33 precipitation 0.1 270 < th dose dependent rect. 8 17
108 6.34 temperature 20.0 90 > th dose independent rect. 8 7
111 6.34 temperature 10.0 270 > th dose independent rect. 11 10
113 6.34 wind 9.0 270 < th dose independent rect. 21 14
115 6.34 atmosphere 995.0 270 > th dose independent rect. 21 14
116 6.34 humidity 50.0 270 > th dose independent rect. 14 16
118 6.34 wind 9.0 270 < th dose independent rect. 6 21
125 6.35 atmosphere 995.0 270 > th dose independent rect. 6 9
159 6.36 precipitation 0.1 270 < th dose independent rect. 1 7
163 6.36 radiation 1.0 270 < th dose independent rect. 3 16
170 6.36 precipitation 0.1 270 < th dose dependent rect. 1 7
177 6.37 wind 7.0 270 < th dose independent rect. 1 7
179 6.37 temperature 10.0 270 > th dose independent rect. 1 7
182 6.37 temperature 30.0 270 < th dose independent rect. 1 7
183 6.37 humidity 50.0 270 > th dose independent rect. 1 7
185 6.37 atmosphere 995.0 270 > th dose independent rect. 1 7
186 6.37 atmosphere 1015.0 270 < th dose independent rect. 1 7
188 6.37 radiation 40.0 270 < th dose independent rect. 1 7
194 6.37 atmosphere 995.0 270 > th dose independent rect. 15 15
202 6.37 radiation 20.0 270 < th dose dependent rect. 2 11
210 6.38 humidity 90.0 90 < th dose independent rect. 8 7
213 6.38 temperature 10.0 270 > th dose independent rect. 13 8
216 6.38 radiation 40.0 90 < th dose independent rect. 13 10
220 6.38 atmosphere 995.0 270 > th dose independent rect. 21 16
225 6.38 radiation 30.0 30 < th dose independent rect. 4 19
230 6.38 humidity 50.0 270 > th dose dependent rect. 2 5
246 6.39 wind 9.0 270 < th dose independent rect. 2 17
259 6.40 temperature 15.0 90 > th dose independent rect. 23 14
261 6.40 precipitation 0.1 270 < th dose independent rect. 21 14
266 6.40 wind 9.0 90 < th dose independent rect. 8 20
276 6.40 precipitation 0.1 270 < th dose dependent rect. 21 14
305 6.41 wind 9.0 90 < th dose independent rect. 8 7
307 6.41 atmosphere 1015.0 90 < th dose independent rect. 8 7
308 6.41 precipitation 0.1 90 < th dose independent rect. 8 7
311 6.41 precipitation 0.1 270 < th dose independent rect. 21 16
313 6.41 atmosphere 995.0 90 > th dose independent rect. 15 17
329 6.41 precipitation 0.1 90 < th dose dependent rect. 8 7
330 6.41 precipitation 0.1 270 < th dose dependent rect. 21 16
343 6.42 temperature 15.0 270 > th dose independent rect. 19 7
345 6.42 precipitation 0.1 270 < th dose independent rect. 19 7
359 6.42 precipitation 0.1 270 < th dose dependent rect. 19 7
362 6.42 radiation 40.0 90 < th dose dependent rect. 15 17
365 6.43 radiation 1.0 270 > th dose independent sin 2 NA
366 6.43 wind 9.0 270 < th dose independent rect. 4 1
367 6.43 temperature 10.0 270 > th dose independent rect. 4 1
369 6.43 temperature 30.0 270 < th dose independent rect. 4 1
370 6.43 humidity 50.0 270 > th dose independent rect. 4 1
373 6.43 atmosphere 995.0 270 > th dose independent rect. 4 1
374 6.43 atmosphere 1010.0 270 < th dose independent rect. 4 1
376 6.43 radiation 20.0 270 < th dose independent rect. 4 1
379 6.43 precipitation 0.1 270 < th dose independent rect. 4 1
388 6.43 wind 7.0 10 < th dose independent rect. 15 17
392 6.43 radiation 30.0 270 < th dose dependent rect. 4 1
394 6.43 precipitation 0.1 270 < th dose dependent rect. 4 1
401 6.43 temperature 10.0 90 > th dose dependent rect. 8 7
407 6.44 radiation 1.0 270 < th dose independent rect. 4 1
413 6.44 wind 1.0 270 > th dose independent rect. 13 8
414 6.44 atmosphere 1015.0 270 < th dose independent rect. 13 8
421 6.44 precipitation 0.1 270 < th dose independent rect. 15 15
426 6.44 radiation 1.0 270 < th dose dependent rect. 4 1
430 6.44 temperature 10.0 270 > th dose dependent rect. 3 3
438 6.44 precipitation 0.1 270 < th dose dependent rect. 15 15
462 6.45 wind 9.0 270 < th dose independent rect. 19 7
464 6.45 temperature 30.0 270 < th dose independent rect. 19 7
465 6.45 humidity 50.0 270 > th dose independent rect. 19 7
467 6.45 atmosphere 995.0 270 > th dose independent rect. 19 7
469 6.45 radiation 1.0 270 < th dose independent rect. 19 7
480 6.45 temperature 10.0 270 > th dose independent rect. 2 17
481 6.45 atmosphere 1015.0 270 < th dose independent rect. 2 17
488 6.45 radiation 1.0 270 < th dose dependent sin 1 NA
500 6.45 radiation 1.0 270 < th dose dependent rect. 19 7
538 6.46 atmosphere 995.0 270 > th dose independent rect. 13 8
541 6.46 wind 9.0 90 < th dose independent rect. 23 14
544 6.46 wind 9.0 270 < th dose independent rect. 8 17
555 6.46 humidity 50.0 270 > th dose dependent rect. 4 1
567 6.46 radiation 40.0 90 < th dose dependent rect. 4 15
593 6.47 atmosphere 995.0 90 > th dose independent rect. 23 14
625 6.48 wind 1.0 90 > th dose independent rect. 8 7
627 6.48 temperature 20.0 10 > th dose independent rect. 8 7
650 6.48 atmosphere 995.0 270 > th dose independent rect. 2 17
673 6.48 humidity 70.0 90 > th dose dependent rect. 4 17
675 6.48 humidity 60.0 10 > th dose dependent rect. 4 19
687 6.49 radiation 1.0 10 > th dose independent rect. 8 8
688 6.49 precipitation 0.1 270 < th dose independent rect. 13 8
698 6.49 precipitation 0.1 270 < th dose independent rect. 2 17
717 6.49 precipitation 0.1 270 < th dose dependent rect. 13 8
719 6.49 humidity 70.0 90 > th dose dependent rect. 4 15
722 6.49 precipitation 0.1 270 < th dose dependent rect. 2 17
726 6.50 radiation 1.0 270 < th dose independent sin 2 NA
758 6.50 temperature 15.0 30 > th dose independent rect. 23 5
783 6.50 humidity 50.0 270 > th dose independent rect. 6 8
801 6.50 radiation 40.0 270 < th dose independent rect. 11 20
856 6.51 atmosphere 995.0 90 > th dose independent rect. 8 20
860 6.51 atmosphere 1015.0 270 < th dose dependent rect. 3 3
866 6.51 wind 9.0 270 < th dose dependent rect. 19 7
867 6.51 temperature 10.0 10 > th dose dependent rect. 8 7
869 6.51 radiation 40.0 90 < th dose dependent rect. 4 7
875 6.51 wind 9.0 270 < th dose dependent rect. 7 19
931 6.52 atmosphere 1015.0 90 < th dose independent rect. 8 20
933 6.52 temperature 30.0 270 < th dose dependent rect. 3 3
948 6.52 wind 9.0 270 < th dose dependent rect. 7 7
959 6.52 temperature 10.0 10 > th dose dependent rect. 8 20
962 6.53 temperature 15.0 270 > th dose independent rect. 21 4
971 6.53 temperature 10.0 10 > th dose independent rect. 8 7
975 6.53 temperature 10.0 1440 > th dose independent rect. 9 7
984 6.53 atmosphere 995.0 10 > th dose independent rect. 8 7
988 6.53 atmosphere 1015.0 10 < th dose independent rect. 8 7
998 6.53 precipitation 0.1 10 < th dose independent rect. 8 7