Os01g0251400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0251400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.15 | 0.58 | 2.96 | -0.0479 | 0.238 | 0.79 | 0.0308 | -2.58 | -0.0316 | 19.2 | 1015 | 10 | -- | -- |
| 155.18 | 0.585 | 2.96 | -0.0774 | 0.237 | 0.81 | -0.0574 | -- | -0.0363 | 19.2 | 1015 | 10 | -- | -- |
| 152.16 | 0.579 | 2.96 | -0.0478 | 0.239 | 0.751 | -- | -2.52 | -0.0315 | 19.2 | 1015 | 13 | -- | -- |
| 155.19 | 0.584 | 2.96 | -0.076 | 0.237 | 0.812 | -- | -- | -0.0363 | 19.2 | 1015 | 10 | -- | -- |
| 155.16 | 0.583 | 2.96 | -0.0522 | -- | 0.794 | -- | -2.51 | -0.0352 | -- | 1015 | 13 | -- | -- |
| 157.43 | 0.588 | 2.96 | -0.0824 | 0.246 | -- | -0.0888 | -- | -0.0456 | 19.6 | -- | -- | -- | -- |
| 157.45 | 0.588 | 2.96 | -0.08 | 0.247 | -- | -- | -- | -0.0456 | 19.5 | -- | -- | -- | -- |
| 158.16 | 0.588 | 2.96 | -0.0803 | -- | 0.855 | -- | -- | -0.04 | -- | 1015 | 10 | -- | -- |
| 155.34 | 0.584 | 2.96 | -- | 0.238 | 0.815 | -- | -- | -0.0278 | 19.1 | 1015 | 10 | -- | -- |
| 160.71 | 0.592 | 2.96 | -0.0836 | -- | -- | -- | -- | -0.0494 | -- | -- | -- | -- | -- |
| 157.62 | 0.587 | 2.96 | -- | 0.248 | -- | -- | -- | -0.0367 | 19.5 | -- | -- | -- | -- |
| 158.33 | 0.588 | 2.95 | -- | -- | 0.858 | -- | -- | -0.0311 | -- | 1015 | 10 | -- | -- |
| 160.89 | 0.592 | 2.96 | -- | -- | -- | -- | -- | -0.0401 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.30 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 2 | 143.30 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 3 | 143.49 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 16 | 144.52 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 23 | 145.78 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 26 | 145.83 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 28 | 145.99 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 35 | 146.17 | humidity | 80.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 48 | 146.44 | temperature | 20.0 | 90 | < th | dose independent | rect. | 14 | 9 |
| 54 | 146.66 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 82 | 146.66 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 135 | 146.86 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 148 | 146.86 | wind | 7.0 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 181 | 147.26 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 183 | 147.36 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 9 |
| 200 | 147.74 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 2 |
| 289 | 148.77 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 15 | 8 |
| 332 | 149.49 | wind | 3.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 342 | 149.74 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 16 | 23 |
| 366 | 149.94 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 384 | 150.08 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 391 | 150.13 | wind | 9.0 | 1440 | > th | dose independent | rect. | 22 | 4 |
| 399 | 150.13 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 407 | 150.14 | wind | 3.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 410 | 150.15 | wind | 9.0 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 414 | 150.15 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 419 | 150.17 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 422 | 150.20 | wind | 9.0 | 90 | > th | dose independent | rect. | 22 | 12 |
| 423 | 150.20 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 462 | 150.25 | temperature | 20.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 507 | 150.31 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 530 | 150.51 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 531 | 150.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 534 | 150.51 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 538 | 150.51 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 548 | 150.51 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 549 | 150.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 570 | 150.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 573 | 150.51 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 600 | 150.62 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 652 | 150.80 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 655 | 150.81 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 656 | 150.81 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 674 | 150.87 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 676 | 150.87 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 703 | 150.94 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 717 | 150.97 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 733 | 151.02 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 735 | 151.02 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 736 | 151.02 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 740 | 151.02 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 742 | 151.02 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 749 | 151.02 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 751 | 151.02 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 777 | 151.05 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 11 | 12 |
| 783 | 151.10 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 796 | 151.17 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 815 | 151.25 | temperature | 20.0 | 90 | < th | dose independent | sin | 18 | NA |
| 872 | 151.32 | temperature | 20.0 | 90 | > th | dose independent | sin | 18 | NA |
| 907 | 151.38 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 912 | 151.39 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 939 | 151.50 | temperature | 20.0 | 10 | < th | dose independent | sin | 17 | NA |
| 945 | 151.52 | temperature | 20.0 | 720 | < th | dose independent | rect. | 12 | 2 |
| 953 | 151.55 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 16 | 13 |
| 972 | 151.65 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 16 | 11 |