Os01g0251200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Steroid nuclear receptor, ligand-binding domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0251200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Steroid nuclear receptor, ligand-binding domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.68 | 0.198 | 10.2 | 0.624 | 0.335 | -0.45 | -0.287 | -0.167 | -0.0175 | 9.79 | 8.082 | 36 | -- | -- |
| 17.72 | 0.196 | 10.2 | 0.619 | 0.331 | -0.454 | -0.109 | -- | -0.0182 | 9.79 | 8.07 | 36 | -- | -- |
| 17.76 | 0.196 | 10.2 | 0.618 | 0.328 | -0.457 | -- | 0.0365 | -0.0182 | 9.79 | 8.1 | 36 | -- | -- |
| 17.76 | 0.196 | 10.2 | 0.615 | 0.334 | -0.451 | -- | -- | -0.0181 | 9.84 | 8.1 | 36 | -- | -- |
| 19.37 | 0.206 | 10.2 | 0.615 | -- | -0.663 | -- | 0.0937 | 0.00398 | -- | 8.1 | 36 | -- | -- |
| 21.17 | 0.216 | 10.2 | 0.613 | 0.818 | -- | -0.065 | -- | 0.0202 | 11.2 | -- | -- | -- | -- |
| 21.19 | 0.216 | 10.2 | 0.61 | 0.818 | -- | -- | -- | 0.02 | 11.2 | -- | -- | -- | -- |
| 19.39 | 0.206 | 10.2 | 0.612 | -- | -0.663 | -- | -- | 0.00258 | -- | 7.754 | 26 | -- | -- |
| 27.67 | 0.246 | 10.2 | -- | 0.33 | -0.434 | -- | -- | -0.0599 | 10.4 | 8.1 | 36 | -- | -- |
| 62.98 | 0.371 | 10.2 | 0.591 | -- | -- | -- | -- | 0.0129 | -- | -- | -- | -- | -- |
| 31.01 | 0.26 | 10.2 | -- | 0.812 | -- | -- | -- | -0.048 | 11.1 | -- | -- | -- | -- |
| 29.13 | 0.251 | 10.2 | -- | -- | -0.655 | -- | -- | -0.075 | -- | 6.827 | 6 | -- | -- |
| 72.19 | 0.397 | 10.2 | -- | -- | -- | -- | -- | -0.0527 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.23 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 14 |
| 21 | 17.59 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 22 | 17.60 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 26 | 17.63 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 30 | 17.66 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 40 | 17.73 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 14 |
| 62 | 17.82 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 1 | 14 |
| 64 | 17.83 | radiation | 1.0 | 30 | > th | dose independent | sin | 3 | NA |
| 65 | 17.83 | radiation | 10.0 | 30 | < th | dose dependent | no | NA | NA |
| 69 | 17.83 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 70 | 17.83 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 71 | 17.83 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 77 | 17.84 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 79 | 17.84 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 88 | 17.86 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 20 |
| 90 | 17.86 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 22 |
| 98 | 17.87 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 113 | 17.91 | radiation | 10.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 129 | 17.94 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 13 | 21 |
| 139 | 17.96 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 13 |
| 145 | 17.97 | radiation | 1.0 | 30 | < th | dose independent | sin | 2 | NA |
| 167 | 17.99 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 13 | 16 |
| 169 | 17.99 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 173 | 17.99 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 174 | 18.00 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 191 | 18.03 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 15 |
| 211 | 18.05 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 226 | 18.07 | radiation | 40.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 232 | 18.07 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 13 | 19 |
| 276 | 18.12 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 277 | 18.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 314 | 18.15 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 351 | 18.18 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 352 | 18.18 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 15 |
| 365 | 18.19 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 366 | 18.19 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 407 | 18.22 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 20 |
| 408 | 18.22 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 3 | 2 |
| 409 | 18.22 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 7 |
| 416 | 18.22 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 427 | 18.24 | radiation | 1.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 438 | 18.24 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 468 | 18.28 | radiation | 1.0 | 90 | < th | dose independent | rect. | 24 | 23 |
| 470 | 18.28 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 506 | 18.30 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 19 |
| 507 | 18.30 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 23 |
| 508 | 18.30 | humidity | 90.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 539 | 18.32 | humidity | 80.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 567 | 18.33 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 643 | 18.38 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 647 | 18.38 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 698 | 18.40 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 711 | 18.41 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 714 | 18.41 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 737 | 18.42 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 742 | 18.42 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 748 | 18.43 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 750 | 18.43 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 751 | 18.43 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 755 | 18.43 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 760 | 18.43 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 17 |
| 762 | 18.43 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 763 | 18.43 | humidity | 60.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 787 | 18.44 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 810 | 18.45 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 4 |
| 811 | 18.45 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 825 | 18.45 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 867 | 18.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 871 | 18.47 | radiation | 20.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 907 | 18.49 | humidity | 60.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 919 | 18.49 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 933 | 18.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 23 |
| 935 | 18.50 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 8 |
| 946 | 18.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 954 | 18.51 | humidity | 60.0 | 270 | > th | dose independent | rect. | 24 | 14 |
| 961 | 18.51 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 11 | 9 |
| 984 | 18.52 | radiation | 10.0 | 90 | < th | dose independent | rect. | 7 | 22 |