Os01g0247600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0247600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.12 | 0.5 | 11.2 | -2.13 | 2.18 | -0.793 | -0.533 | -3.6 | -0.81 | 22 | 28.48 | 247 | -- | -- |
| 128.9 | 0.529 | 11.3 | -2.72 | 2.15 | -0.745 | -0.77 | -- | -0.931 | 22 | 31.49 | 294 | -- | -- |
| 113.73 | 0.497 | 11.2 | -2.1 | 2.22 | -0.767 | -- | -3.76 | -0.8 | 22 | 29.3 | 176 | -- | -- |
| 131.03 | 0.533 | 11.3 | -2.75 | 2.15 | -0.761 | -- | -- | -0.956 | 22 | 31.2 | 302 | -- | -- |
| 338.71 | 0.857 | 11.2 | -2.43 | -- | -1.95 | -- | -2.06 | -0.954 | -- | 49.5 | 727 | -- | -- |
| 136.54 | 0.548 | 11.2 | -2.59 | 2.2 | -- | -0.702 | -- | -0.82 | 21.6 | -- | -- | -- | -- |
| 138.38 | 0.551 | 11.2 | -2.57 | 2.21 | -- | -- | -- | -0.819 | 21.6 | -- | -- | -- | -- |
| 341.62 | 0.861 | 11.3 | -3.13 | -- | -2.33 | -- | -- | -1.18 | -- | 178.6 | 722 | -- | -- |
| 293.94 | 0.799 | 11.2 | -- | 2.21 | 1.8 | -- | -- | -0.502 | 21.4 | 19.03 | 2 | -- | -- |
| 426.58 | 0.965 | 11.2 | -2.55 | -- | -- | -- | -- | -0.824 | -- | -- | -- | -- | -- |
| 311.78 | 0.826 | 11.2 | -- | 2.21 | -- | -- | -- | -0.533 | 21.5 | -- | -- | -- | -- |
| 557.38 | 1.1 | 11.1 | -- | -- | 1.57 | -- | -- | -0.346 | -- | 23.7 | 2 | -- | -- |
| 597.84 | 1.14 | 11.1 | -- | -- | -- | -- | -- | -0.541 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.83 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 3 | 109.62 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 5 | 110.14 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 10 | 110.83 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 11 | 110.86 | temperature | 20.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 17 | 111.30 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 30 | 111.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 40 | 112.13 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 13 |
| 49 | 112.26 | temperature | 30.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 63 | 112.59 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 86 | 113.03 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 102 | 113.33 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 122 | 113.53 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 131 | 113.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 151 | 113.83 | temperature | 25.0 | 720 | > th | dose independent | rect. | 22 | 21 |
| 154 | 113.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 155 | 113.86 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 172 | 114.03 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 177 | 114.06 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 195 | 114.21 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 211 | 114.39 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 233 | 114.56 | temperature | 25.0 | 720 | > th | dose independent | sin | 7 | NA |
| 238 | 114.61 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 241 | 114.64 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 21 |
| 254 | 114.73 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 293 | 114.96 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 297 | 114.99 | temperature | 15.0 | 90 | > th | dose dependent | no | NA | NA |
| 302 | 115.01 | temperature | 25.0 | 720 | > th | dose independent | rect. | 22 | 15 |
| 319 | 115.09 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 332 | 115.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 347 | 115.21 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 358 | 115.28 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 13 | 16 |
| 420 | 115.49 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 17 |
| 430 | 115.53 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 433 | 115.55 | temperature | 25.0 | 720 | > th | dose independent | no | NA | NA |
| 449 | 115.62 | temperature | 25.0 | 720 | > th | dose independent | rect. | 6 | 23 |
| 451 | 115.63 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 456 | 115.64 | temperature | 20.0 | 10 | > th | dose dependent | no | NA | NA |
| 486 | 115.76 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 503 | 115.82 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 535 | 115.90 | temperature | 25.0 | 720 | < th | dose independent | rect. | 3 | 23 |
| 550 | 115.94 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 562 | 115.98 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 15 | 14 |
| 571 | 116.00 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 582 | 116.03 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 621 | 116.13 | temperature | 25.0 | 720 | < th | dose independent | no | NA | NA |
| 635 | 116.16 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 668 | 116.24 | temperature | 25.0 | 720 | < th | dose independent | rect. | 23 | 23 |
| 698 | 116.31 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 23 |
| 733 | 116.39 | temperature | 25.0 | 720 | < th | dose independent | rect. | 9 | 23 |
| 744 | 116.43 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 826 | 116.61 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 828 | 116.62 | wind | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 839 | 116.63 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 864 | 116.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 901 | 116.76 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 942 | 116.84 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 951 | 116.86 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 991 | 116.94 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 998 | 116.96 | wind | 1.0 | 14400 | > th | dose independent | rect. | 18 | 6 |