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Os01g0247500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.43 (0.0265) R2 : 0.224
β1 : 1.09 (0.0971) R2dD : 0.221 R2D : 0.176
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.259 (0.0566) R2dN8 : 0.0478 R2N8 : 0.00258
σ : 0.498
deviance : 113.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.27 0.456 9.41 1.12 0.565 -0.339 0.47 -1.17 0.265 9 12.1 22 -- --
99.11 0.467 9.41 1.13 0.558 -0.353 -0.538 -- 0.261 9.18 14.9 13 -- --
94.08 0.452 9.42 1.14 0.558 -0.338 -- -0.953 0.255 8.85 14.84 9 -- --
99.29 0.464 9.41 1.1 0.568 -0.357 -- -- 0.257 8.88 14.87 10 -- --
107.2 0.485 9.43 1.12 -- -0.0954 -- -0.928 0.257 -- 14.84 9 -- --
103.15 0.476 9.42 1.07 0.402 -- 0.81 -- 0.253 5.39 -- -- -- --
103.89 0.477 9.42 1.08 0.428 -- -- -- 0.25 6.47 -- -- -- --
110.87 0.493 9.42 1.14 -- 0.683 -- -- 0.279 -- 60 27 -- --
128.33 0.528 9.42 -- 0.651 -0.397 -- -- 0.158 9.15 9.982 26 -- --
113.4 0.498 9.43 1.09 -- -- -- -- 0.259 -- -- -- -- --
134.36 0.542 9.45 -- 0.442 -- -- -- 0.13 6.33 -- -- -- --
143.61 0.56 9.46 -- -- -0.0935 -- -- 0.132 -- 9.982 26 -- --
144.51 0.561 9.46 -- -- -- -- -- 0.139 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 84.81 humidity 60.0 14400 > th dose independent rect. 1 7
2 85.04 humidity 60.0 14400 > th dose independent rect. 3 5
4 86.19 temperature 20.0 270 > th dose independent rect. 5 8
5 86.39 temperature 15.0 270 > th dose independent rect. 13 16
6 86.58 precipitation 0.1 270 < th dose independent rect. 13 16
7 86.58 precipitation 0.1 270 < th dose dependent rect. 13 16
8 86.74 humidity 50.0 270 > th dose independent rect. 5 8
11 87.05 wind 7.0 270 < th dose independent rect. 13 16
19 87.59 temperature 10.0 270 > th dose independent rect. 5 8
20 87.59 atmosphere 995.0 270 > th dose independent rect. 5 8
21 87.59 atmosphere 1015.0 270 < th dose independent rect. 5 8
24 87.63 precipitation 0.1 270 < th dose independent rect. 5 8
25 87.63 precipitation 0.1 270 < th dose dependent rect. 5 8
26 87.66 wind 9.0 270 < th dose independent rect. 5 8
29 87.72 wind 5.0 720 > th dose independent rect. 21 1
35 87.78 wind 5.0 270 < th dose independent rect. 24 6
37 87.79 temperature 10.0 270 > th dose dependent rect. 5 7
50 88.16 humidity 50.0 270 > th dose dependent rect. 18 7
59 88.24 radiation 1.0 270 > th dose independent rect. 4 9
72 88.33 wind 3.0 720 > th dose dependent rect. 21 1
73 88.35 wind 7.0 270 < th dose independent rect. 1 16
74 88.35 wind 7.0 270 < th dose independent rect. 24 18
76 88.36 precipitation 0.1 270 < th dose independent rect. 1 16
77 88.36 precipitation 0.1 270 < th dose dependent rect. 1 16
78 88.37 wind 7.0 270 < th dose dependent rect. 24 6
80 88.39 radiation 40.0 270 < th dose independent rect. 13 16
94 88.47 humidity 90.0 720 > th dose dependent rect. 20 1
96 88.49 atmosphere 995.0 270 > th dose independent rect. 13 16
104 88.54 wind 5.0 10 < th dose independent rect. 2 6
105 88.55 humidity 50.0 10 > th dose independent rect. 8 18
108 88.59 radiation 20.0 10 < th dose independent rect. 2 6
109 88.60 precipitation 0.1 10 < th dose independent rect. 2 6
110 88.60 precipitation 0.1 10 < th dose dependent rect. 2 6
111 88.61 wind 1.0 270 > th dose independent rect. 6 7
113 88.61 temperature 15.0 270 > th dose independent rect. 17 8
114 88.62 wind 7.0 10 < th dose dependent rect. 2 6
122 88.65 humidity 50.0 30 > th dose dependent rect. 8 18
124 88.66 wind 7.0 10 < th dose dependent rect. 24 8
125 88.67 radiation 20.0 270 < th dose dependent rect. 24 8
131 88.71 wind 9.0 270 < th dose dependent rect. 24 18
141 88.74 radiation 10.0 270 < th dose independent rect. 24 7
142 88.77 humidity 60.0 270 > th dose independent rect. 7 4
152 88.84 temperature 20.0 270 > th dose independent rect. 5 19
160 88.87 humidity 50.0 270 > th dose independent rect. 7 17
163 88.88 wind 3.0 30 < th dose independent rect. 24 8
177 88.93 wind 5.0 720 > th dose independent rect. 17 6
178 88.93 precipitation 0.1 270 < th dose independent rect. 24 7
180 88.93 precipitation 0.1 270 < th dose dependent rect. 24 7
185 88.95 radiation 20.0 30 < th dose independent rect. 2 8
210 88.99 radiation 40.0 30 < th dose dependent rect. 2 8
228 89.04 radiation 40.0 30 < th dose dependent rect. 14 18
229 89.05 humidity 50.0 270 > th dose independent rect. 17 8
240 89.08 radiation 30.0 270 < th dose dependent rect. 17 8
247 89.11 radiation 20.0 270 < th dose independent rect. 17 8
250 89.11 temperature 10.0 270 > th dose independent rect. 1 16
251 89.11 atmosphere 1015.0 270 < th dose independent rect. 1 16
272 89.16 temperature 15.0 270 > th dose independent rect. 11 20
273 89.16 precipitation 0.1 270 < th dose independent rect. 11 20
274 89.16 radiation 40.0 30 < th dose dependent rect. 2 6
275 89.16 precipitation 0.1 270 < th dose dependent rect. 11 20
277 89.17 wind 9.0 270 < th dose independent rect. 17 8
278 89.17 atmosphere 1005.0 270 < th dose independent rect. 18 8
293 89.21 temperature 25.0 270 < th dose independent rect. 24 8
310 89.25 humidity 70.0 270 > th dose independent rect. 24 7
325 89.29 humidity 70.0 10 > th dose independent rect. 2 6
343 89.33 temperature 10.0 270 > th dose independent rect. 24 7
346 89.33 humidity 50.0 270 > th dose independent rect. 24 7
348 89.33 atmosphere 995.0 270 > th dose independent rect. 24 7
351 89.33 temperature 10.0 270 > th dose independent rect. 7 17
354 89.34 atmosphere 1015.0 270 < th dose independent rect. 24 7
358 89.35 radiation 20.0 270 < th dose independent rect. 18 6
363 89.35 temperature 10.0 270 > th dose independent rect. 24 18
367 89.36 atmosphere 995.0 270 > th dose independent rect. 1 16
368 89.36 wind 9.0 270 < th dose independent rect. 7 17
369 89.36 atmosphere 1015.0 270 < th dose independent rect. 24 18
385 89.38 wind 9.0 270 < th dose independent rect. 18 6
400 89.41 temperature 15.0 10 > th dose independent rect. 8 18
406 89.41 humidity 50.0 270 > th dose dependent rect. 19 16
421 89.43 humidity 50.0 10 > th dose independent rect. 8 16
428 89.45 atmosphere 995.0 270 > th dose independent rect. 18 6
449 89.48 atmosphere 1010.0 10 < th dose dependent rect. 20 8
462 89.50 humidity 50.0 270 > th dose dependent rect. 6 7
463 89.51 wind 5.0 720 > th dose independent rect. 17 2
485 89.54 temperature 10.0 10 > th dose independent rect. 2 6
489 89.54 temperature 30.0 10 < th dose independent rect. 2 6
491 89.54 humidity 50.0 10 > th dose independent rect. 2 6
496 89.54 atmosphere 995.0 10 > th dose independent rect. 2 6
498 89.54 atmosphere 1015.0 10 < th dose independent rect. 2 6
514 89.56 atmosphere 1015.0 270 < th dose dependent rect. 18 7
535 89.60 temperature 30.0 270 < th dose independent rect. 18 6
537 89.60 wind 9.0 1440 < th dose independent rect. 1 8
579 89.66 radiation 1.0 270 < th dose dependent rect. 10 14
581 89.66 radiation 1.0 270 < th dose dependent rect. 6 18
596 89.67 radiation 1.0 270 < th dose dependent rect. 12 12
620 89.70 wind 9.0 10 < th dose independent rect. 8 18
621 89.70 wind 9.0 270 < th dose dependent rect. 18 5
630 89.71 precipitation 0.1 10 < th dose independent rect. 24 8
633 89.71 precipitation 0.1 10 < th dose dependent rect. 24 8
636 89.72 precipitation 0.1 10 < th dose independent rect. 8 18
640 89.72 precipitation 0.1 10 < th dose dependent rect. 8 18
649 89.74 temperature 15.0 10 > th dose independent rect. 15 17
654 89.75 wind 1.0 270 > th dose independent rect. 7 4
674 89.76 wind 9.0 1440 < th dose independent rect. 3 6
675 89.76 temperature 10.0 1440 > th dose independent rect. 3 6
678 89.76 humidity 50.0 1440 > th dose independent rect. 3 6
680 89.76 atmosphere 995.0 1440 > th dose independent rect. 3 6
684 89.76 temperature 10.0 1440 > th dose independent rect. 9 18
691 89.77 humidity 50.0 30 > th dose independent rect. 8 7
694 89.77 radiation 1.0 270 < th dose independent rect. 24 17
701 89.79 radiation 20.0 30 < th dose independent rect. 24 10
734 89.84 radiation 1.0 270 < th dose independent rect. 24 12
743 89.85 radiation 1.0 270 < th dose independent rect. 24 10
774 89.88 radiation 1.0 270 < th dose dependent sin 18 NA
791 89.90 wind 9.0 270 < th dose dependent rect. 17 7
795 89.91 wind 7.0 270 < th dose independent rect. 11 20
813 89.93 radiation 40.0 90 < th dose independent rect. 1 10
816 89.93 radiation 20.0 30 < th dose independent rect. 15 17
822 89.93 radiation 1.0 270 < th dose dependent rect. 24 17
824 89.94 radiation 1.0 270 > th dose independent sin 5 NA
851 89.97 atmosphere 1015.0 270 < th dose independent rect. 18 6
900 90.02 atmosphere 1000.0 10 > th dose dependent rect. 24 8
909 90.04 atmosphere 1015.0 270 < th dose independent rect. 6 18
960 90.08 radiation 1.0 270 < th dose independent rect. 9 15
970 90.09 humidity 70.0 4320 > th dose independent rect. 20 7
978 90.09 temperature 10.0 270 > th dose dependent rect. 13 16
981 90.10 radiation 1.0 270 < th dose independent rect. 12 12
985 90.10 temperature 10.0 270 > th dose dependent rect. 24 6
994 90.11 humidity 70.0 270 > th dose dependent rect. 21 1