Os01g0245700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os01g0245700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 478.53 | 1.03 | 2.36 | 4.97 | 0.0938 | 60.8 | -0.454 | -370 | -0.128 | 22 | 995.1 | 712 | -- | -- |
| 490.19 | 1.04 | 3.15 | 0.226 | 0.108 | 0.478 | -0.398 | -- | -0.139 | 22.5 | 994.9 | 325 | -- | -- |
| 479.29 | 1.02 | 2.36 | 4.95 | 0.0941 | 60.7 | -- | -369 | -0.127 | 22.9 | 995 | 708 | -- | -- |
| 490.38 | 1.03 | 3.16 | 0.246 | 0.0999 | 0.522 | -- | -- | -0.143 | 23.4 | 995.5 | 127 | -- | -- |
| 479.89 | 1.02 | 2.36 | 4.95 | -- | 60.7 | -- | -369 | -0.126 | -- | 995 | 708 | -- | -- |
| 490.65 | 1.04 | 3.15 | 0.221 | 0.107 | -- | -0.397 | -- | -0.137 | 22.5 | -- | -- | -- | -- |
| 491.1 | 1.04 | 3.15 | 0.234 | 0.121 | -- | -- | -- | -0.137 | 0.502 | -- | -- | -- | -- |
| 491.08 | 1.03 | 3.15 | 0.249 | -- | 0.547 | -- | -- | -0.14 | -- | 995.5 | 115 | -- | -- |
| 491.8 | 1.03 | 3.16 | -- | 0.114 | 0.517 | -- | -- | -0.168 | 23.3 | 995.6 | 115 | -- | -- |
| 492.03 | 1.04 | 3.15 | 0.238 | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
| 492.55 | 1.04 | 3.16 | -- | 0.125 | -- | -- | -- | -0.163 | 0.596 | -- | -- | -- | -- |
| 492.71 | 1.03 | 3.15 | -- | -- | 0.518 | -- | -- | -0.167 | -- | 995.5 | 115 | -- | -- |
| 493.53 | 1.04 | 3.15 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 461.78 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 6 | 461.78 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 29 | 466.95 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 33 | 467.50 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 1 |
| 35 | 467.62 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 36 | 467.62 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 37 | 467.64 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 57 | 467.96 | wind | 3.0 | 30 | > th | dose independent | rect. | 21 | 2 |
| 73 | 468.69 | wind | 1.0 | 30 | > th | dose dependent | rect. | 21 | 2 |
| 97 | 469.62 | wind | 7.0 | 30 | > th | dose dependent | rect. | 18 | 4 |
| 104 | 469.77 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 116 | 469.99 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 123 | 469.99 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 150 | 470.58 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 162 | 471.00 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 8 |
| 173 | 471.20 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 20 | 12 |
| 181 | 471.43 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 8 |
| 186 | 471.57 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 188 | 471.57 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 203 | 471.98 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 24 | 8 |
| 216 | 472.28 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 24 | 9 |
| 225 | 472.52 | wind | 7.0 | 30 | > th | dose independent | rect. | 18 | 4 |
| 257 | 473.10 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 266 | 473.22 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 1 |
| 277 | 473.22 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 287 | 473.23 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 18 | 22 |
| 296 | 473.44 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 337 | 473.44 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 382 | 473.49 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 1 |
| 384 | 473.49 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 411 | 473.79 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 20 | 2 |
| 430 | 474.07 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 21 | 2 |
| 432 | 474.10 | wind | 7.0 | 30 | > th | dose dependent | sin | 11 | NA |
| 438 | 474.24 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 24 | 12 |
| 450 | 474.33 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 452 | 474.34 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 18 | 9 |
| 471 | 474.44 | atmosphere | 995.0 | 720 | < th | dose independent | sin | 7 | NA |
| 490 | 474.52 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 12 |
| 514 | 474.70 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 515 | 474.73 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 24 | 1 |
| 517 | 474.74 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 521 | 474.80 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 11 |
| 524 | 474.85 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 8 |
| 529 | 474.96 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 553 | 475.24 | temperature | 25.0 | 90 | > th | dose independent | rect. | 20 | 13 |
| 555 | 475.25 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 24 | 21 |
| 561 | 475.29 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 5 | NA |
| 562 | 475.29 | atmosphere | 995.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 564 | 475.30 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 11 |
| 585 | 475.44 | temperature | 25.0 | 90 | < th | dose independent | rect. | 21 | 14 |
| 588 | 475.46 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 18 |
| 594 | 475.54 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 18 | 20 |
| 599 | 475.60 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 1 | 11 |
| 614 | 475.73 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 616 | 475.74 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 622 | 475.75 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 650 | 475.82 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 20 | 18 |
| 661 | 475.92 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 691 | 476.17 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 699 | 476.27 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 9 |
| 712 | 476.34 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 717 | 476.39 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 719 | 476.41 | wind | 3.0 | 90 | < th | dose dependent | rect. | 8 | 16 |
| 734 | 476.56 | wind | 3.0 | 90 | < th | dose dependent | rect. | 22 | 2 |
| 756 | 476.74 | humidity | 80.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 762 | 476.76 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 772 | 476.86 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 790 | 476.95 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 797 | 476.98 | wind | 1.0 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 798 | 476.99 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 799 | 476.99 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 11 |
| 813 | 477.04 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 818 | 477.06 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 21 | 14 |
| 832 | 477.10 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 3 |
| 836 | 477.12 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 839 | 477.14 | humidity | 90.0 | 90 | > th | dose independent | rect. | 21 | 1 |
| 869 | 477.22 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 882 | 477.24 | humidity | 80.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 885 | 477.24 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 11 |