Os01g0243600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0243600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184.21 | 0.638 | 4.39 | 1.16 | 0.318 | -1.37 | 0.417 | 2.44 | 0.238 | 13.1 | 23.73 | 4342 | -- | -- |
| 185.65 | 0.635 | 4.44 | 0.616 | 0.328 | -1.24 | 0.407 | -- | 0.208 | 13 | 21.2 | 4341 | -- | -- |
| 184.79 | 0.633 | 4.39 | 1.15 | 0.3 | -1.34 | -- | 2.1 | 0.271 | 13 | 23 | 4357 | -- | -- |
| 186.29 | 0.636 | 4.45 | 0.624 | 0.327 | -1.22 | -- | -- | 0.201 | 13.2 | 21.15 | 4341 | -- | -- |
| 190.2 | 0.642 | 4.4 | 1.08 | -- | -1.39 | -- | 1.93 | 0.267 | -- | 22.9 | 4155 | -- | -- |
| 228.16 | 0.708 | 4.51 | 0.0815 | 0.402 | -- | 0.462 | -- | -0.0414 | 13.3 | -- | -- | -- | -- |
| 229.03 | 0.709 | 4.5 | 0.0979 | 0.402 | -- | -- | -- | -0.0386 | 13.4 | -- | -- | -- | -- |
| 191.55 | 0.645 | 4.45 | 0.613 | -- | -1.28 | -- | -- | 0.2 | -- | 21.2 | 4048 | -- | -- |
| 193.98 | 0.649 | 4.48 | -- | 0.315 | -1.01 | -- | -- | 0.0566 | 13.3 | 22.97 | 4304 | -- | -- |
| 238.99 | 0.722 | 4.51 | 0.082 | -- | -- | -- | -- | -0.0471 | -- | -- | -- | -- | -- |
| 229.28 | 0.708 | 4.51 | -- | 0.401 | -- | -- | -- | -0.0495 | 13.4 | -- | -- | -- | -- |
| 199.16 | 0.657 | 4.49 | -- | -- | -1.08 | -- | -- | 0.0407 | -- | 23.17 | 4069 | -- | -- |
| 239.16 | 0.722 | 4.51 | -- | -- | -- | -- | -- | -0.0562 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 2 | 180.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 7 | 181.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 14 | 182.35 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 16 | 182.53 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 17 | 182.54 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 27 | 183.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 31 | 183.28 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 55 | 183.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 68 | 183.95 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 73 | 184.09 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 78 | 184.22 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 79 | 184.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 81 | 184.23 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 82 | 184.27 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 87 | 184.33 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 91 | 184.36 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 97 | 184.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 107 | 184.45 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 109 | 184.47 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 17 |
| 111 | 184.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 112 | 184.48 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 10 |
| 117 | 184.51 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 8 |
| 120 | 184.52 | temperature | 25 | 4320 | > th | dose dependent | sin | 5 | NA |
| 128 | 184.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 133 | 184.55 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 21 |
| 155 | 184.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 157 | 184.64 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 158 | 184.65 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 13 |
| 213 | 184.77 | temperature | 10 | 4320 | > th | dose dependent | rect. | 14 | 8 |
| 221 | 184.79 | temperature | 20 | 4320 | > th | dose dependent | sin | 17 | NA |
| 232 | 184.81 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 243 | 184.82 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 15 |
| 332 | 184.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 20 |
| 363 | 184.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 438 | 185.02 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 474 | 185.05 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 482 | 185.06 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 517 | 185.09 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 16 |
| 539 | 185.11 | temperature | 10 | 4320 | > th | dose dependent | sin | 17 | NA |
| 581 | 185.15 | temperature | 10 | 1440 | > th | dose dependent | sin | 3 | NA |
| 584 | 185.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 639 | 185.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 670 | 185.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 711 | 185.25 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 21 |
| 856 | 185.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 22 |
| 944 | 185.42 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |