Os01g0243400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0243400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.9 | 0.558 | 7.82 | 0.644 | 0.449 | -1.1 | 1.6 | 1.67 | 0.33 | 3.65 | 10.06 | 91 | -- | -- |
| 142.54 | 0.56 | 7.84 | 0.39 | 0.444 | -1.1 | 1.25 | -- | 0.267 | 4.1 | 10.06 | 91 | -- | -- |
| 146.9 | 0.569 | 7.85 | 0.364 | 0.44 | -1.14 | -- | -0.133 | 0.261 | 3.84 | 1.394 | 67 | -- | -- |
| 146.48 | 0.564 | 7.85 | 0.391 | 0.426 | -1.14 | -- | -- | 0.266 | 3.22 | 7.953 | 91 | -- | -- |
| 153.43 | 0.577 | 7.84 | 0.502 | -- | -1.62 | -- | -0.0399 | 0.34 | -- | 8.148 | 86 | -- | -- |
| 154.19 | 0.582 | 7.88 | 0.186 | 0.747 | -- | 1.31 | -- | 0.113 | 3.41 | -- | -- | -- | -- |
| 159.44 | 0.591 | 7.89 | 0.162 | 0.751 | -- | -- | -- | 0.105 | 3.18 | -- | -- | -- | -- |
| 153.43 | 0.577 | 7.83 | 0.507 | -- | -1.62 | -- | -- | 0.342 | -- | 9.144 | 86 | -- | -- |
| 150.23 | 0.571 | 7.86 | -- | 0.487 | -0.951 | -- | -- | 0.199 | 3.21 | 9.47 | 91 | -- | -- |
| 191.45 | 0.647 | 7.88 | 0.194 | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
| 160.13 | 0.592 | 7.89 | -- | 0.754 | -- | -- | -- | 0.0874 | 3.18 | -- | -- | -- | -- |
| 157.88 | 0.585 | 7.86 | -- | -- | -1.14 | -- | -- | 0.209 | -- | 24.21 | 96 | -- | -- |
| 192.44 | 0.648 | 7.89 | -- | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.32 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 3 | 132.90 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 20 |
| 11 | 134.38 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 20 | 20 |
| 12 | 134.63 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 14 | 134.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 15 | 134.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 21 |
| 25 | 135.16 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 1 | 15 |
| 29 | 135.19 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 36 | 135.38 | temperature | 30 | 90 | < th | dose independent | rect. | 4 | 15 |
| 45 | 135.77 | temperature | 10 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 46 | 135.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 53 | 135.93 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 9 |
| 64 | 136.19 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 88 | 136.69 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 24 | 15 |
| 90 | 136.74 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 20 |
| 92 | 136.80 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 1 | 15 |
| 105 | 137.16 | temperature | 20 | 30 | > th | dose independent | rect. | 1 | 3 |
| 123 | 137.50 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 150 | 137.86 | temperature | 30 | 90 | < th | dose independent | rect. | 3 | 22 |
| 152 | 137.91 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 20 |
| 189 | 138.38 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 195 | 138.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 198 | 138.51 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 207 | 138.58 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 215 | 138.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 227 | 138.72 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 4 | 21 |
| 243 | 138.80 | wind | 1 | 30 | > th | dose independent | rect. | 16 | 20 |
| 251 | 138.86 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 273 | 139.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 286 | 139.11 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 289 | 139.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 291 | 139.14 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 16 | 17 |
| 308 | 139.22 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 3 |
| 309 | 139.23 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 340 | 139.30 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 383 | 139.55 | temperature | 30 | 90 | < th | dose independent | rect. | 15 | 21 |
| 392 | 139.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 410 | 139.65 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 7 |
| 429 | 139.77 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 431 | 139.78 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 21 |
| 434 | 139.79 | radiation | 30 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 439 | 139.80 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 464 | 139.91 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 23 |
| 473 | 139.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 497 | 140.05 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 16 | 17 |
| 502 | 140.07 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 508 | 140.08 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 518 | 140.12 | humidity | 90 | 4320 | > th | dose dependent | rect. | 5 | 15 |
| 528 | 140.16 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 22 |
| 544 | 140.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 563 | 140.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 599 | 140.40 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 627 | 140.47 | temperature | 15 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 646 | 140.53 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 676 | 140.61 | atmosphere | 1010 | 10 | < th | dose independent | sin | 7 | NA |
| 705 | 140.68 | wind | 1 | 270 | > th | dose independent | rect. | 13 | 23 |
| 743 | 140.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 765 | 140.82 | radiation | 30 | 10 | < th | dose dependent | rect. | 5 | 20 |
| 768 | 140.84 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 13 |
| 804 | 140.90 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 820 | 140.94 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 828 | 140.94 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 1 | 10 |
| 847 | 140.98 | radiation | 10 | 10 | < th | dose independent | rect. | 5 | 20 |
| 857 | 141.00 | humidity | 90 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 868 | 141.02 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 9 | 7 |
| 878 | 141.03 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 898 | 141.08 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 4 | 21 |
| 900 | 141.08 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 927 | 141.13 | temperature | 30 | 90 | < th | dose independent | rect. | 15 | 4 |
| 964 | 141.21 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 966 | 141.21 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 8 |
| 983 | 141.24 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 15 | 21 |
| 994 | 141.26 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |