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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0243000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.46 (0.0332) R2 : 0.0231
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.23 (0.0699) R2dN8 : 0.0298 R2N8 : 0.0231
σ : 0.625
deviance : 179.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
160.26 0.595 4.53 -0.274 0.326 1.07 1.33 4.67 0.191 1.18 0.7986 1419 -- --
167.33 0.602 4.43 0.21 0.0504 0.454 1.17 -- 0.321 0.563 11.5 1741 -- --
164.46 0.597 4.52 -0.308 0.0976 0.844 -- 4.85 0.18 0.908 1.111 1529 -- --
172.2 0.611 4.44 0.176 0.112 0.412 -- -- 0.314 1.23 18.34 1718 -- --
164.57 0.597 4.51 -0.217 -- 0.772 -- 4.33 0.189 -- 1.165 1575 -- --
170.9 0.613 4.45 0.177 0.248 -- 1.03 -- 0.247 1.45 -- -- -- --
174.77 0.619 4.46 0.141 0.268 -- -- -- 0.24 2.74 -- -- -- --
172.51 0.612 4.44 0.145 -- 0.507 -- -- 0.308 -- 10.79 1773 -- --
172.78 0.612 4.45 -- 0.191 0.355 -- -- 0.284 2.54 20.82 1696 -- --
178.95 0.625 4.45 0.152 -- -- -- -- 0.246 -- -- -- -- --
175.3 0.619 4.46 -- 0.271 -- -- -- 0.224 2.75 -- -- -- --
173.02 0.613 4.44 -- -- 0.516 -- -- 0.301 -- 9.981 1773 -- --
179.56 0.625 4.46 -- -- -- -- -- 0.23 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 156.24 wind 9.0 14400 > th dose independent rect. 6 5
2 156.42 radiation 1.0 720 < th dose dependent rect. 6 19
4 156.61 radiation 20.0 43200 < th dose independent rect. 21 9
6 156.70 humidity 90.0 14400 > th dose dependent rect. 3 18
7 156.71 humidity 90.0 14400 > th dose dependent rect. 2 20
11 156.82 humidity 90.0 14400 > th dose dependent rect. 7 1
12 156.90 wind 9.0 14400 > th dose dependent rect. 5 7
14 156.94 humidity 90.0 14400 > th dose dependent sin 0 NA
18 156.99 radiation 20.0 43200 < th dose independent rect. 24 6
20 157.02 humidity 90.0 14400 > th dose independent rect. 1 22
25 157.06 humidity 90.0 14400 > th dose dependent rect. 6 4
33 157.19 humidity 90.0 14400 > th dose independent rect. 5 5
35 157.20 temperature 20.0 14400 > th dose independent rect. 18 1
38 157.22 humidity 90.0 14400 > th dose independent rect. 16 20
39 157.22 humidity 90.0 14400 > th dose independent rect. 16 22
46 157.24 humidity 90.0 14400 > th dose independent rect. 7 23
49 157.26 humidity 90.0 14400 > th dose independent rect. 7 21
56 157.29 radiation 20.0 43200 < th dose independent rect. 19 11
65 157.31 wind 3.0 43200 < th dose independent rect. 1 6
69 157.32 temperature 20.0 14400 < th dose independent rect. 18 2
70 157.32 wind 3.0 43200 < th dose independent rect. 1 3
78 157.35 wind 3.0 43200 > th dose independent rect. 1 6
80 157.35 humidity 90.0 14400 > th dose independent rect. 5 23
83 157.36 humidity 90.0 14400 < th dose independent rect. 5 5
85 157.36 humidity 90.0 14400 > th dose independent rect. 13 22
95 157.38 humidity 90.0 14400 > th dose independent rect. 11 23
102 157.40 humidity 90.0 14400 > th dose independent no NA NA
103 157.40 wind 9.0 14400 < th dose independent rect. 9 2
108 157.40 wind 9.0 4320 > th dose dependent rect. 11 2
114 157.41 wind 5.0 4320 > th dose dependent rect. 21 1
115 157.42 wind 9.0 14400 > th dose independent rect. 9 2
128 157.45 humidity 90.0 14400 > th dose independent rect. 19 23
137 157.48 wind 3.0 43200 > th dose independent rect. 1 3
139 157.48 precipitation 0.1 14400 > th dose independent rect. 6 10
149 157.50 humidity 90.0 14400 > th dose independent rect. 3 8
157 157.52 temperature 20.0 14400 < th dose independent rect. 17 4
160 157.52 humidity 80.0 14400 > th dose dependent rect. 13 2
172 157.54 precipitation 0.1 14400 < th dose independent rect. 6 10
174 157.54 precipitation 0.1 14400 < th dose dependent rect. 6 10
176 157.55 humidity 80.0 14400 > th dose independent rect. 13 3
184 157.56 humidity 80.0 14400 > th dose dependent rect. 12 5
195 157.59 humidity 90.0 14400 > th dose independent rect. 2 12
226 157.62 humidity 90.0 14400 > th dose dependent rect. 7 21
227 157.63 humidity 90.0 14400 > th dose independent sin 16 NA
228 157.63 humidity 90.0 14400 > th dose independent sin 2 NA
249 157.67 humidity 90.0 14400 > th dose independent rect. 17 8
253 157.68 humidity 90.0 14400 > th dose independent rect. 7 1
262 157.69 wind 3.0 43200 > th dose independent rect. 4 3
272 157.70 precipitation 0.1 14400 > th dose independent rect. 7 7
280 157.71 humidity 90.0 14400 > th dose independent rect. 21 2
288 157.72 humidity 80.0 14400 < th dose independent rect. 14 1
289 157.72 wind 3.0 43200 < th dose independent rect. 4 3
299 157.73 humidity 90.0 14400 > th dose independent rect. 19 4
314 157.75 humidity 90.0 14400 > th dose independent rect. 18 6
334 157.77 wind 9.0 14400 > th dose dependent rect. 9 3
362 157.80 humidity 90.0 14400 < th dose independent rect. 1 21
376 157.82 humidity 90.0 14400 > th dose independent rect. 16 11
406 157.85 precipitation 0.1 14400 > th dose dependent rect. 6 9
426 157.87 humidity 80.0 43200 < th dose dependent rect. 5 2
430 157.88 wind 9.0 4320 < th dose independent rect. 11 2
466 157.91 wind 9.0 14400 < th dose independent rect. 22 15
473 157.91 humidity 90.0 14400 > th dose dependent rect. 15 23
480 157.92 humidity 90.0 14400 > th dose dependent no NA NA
504 157.94 humidity 90.0 14400 > th dose dependent rect. 13 23
518 157.97 temperature 25.0 30 > th dose independent rect. 4 6
519 157.97 radiation 1.0 4320 < th dose independent rect. 21 8
551 157.99 humidity 80.0 14400 > th dose dependent rect. 16 1
554 157.99 radiation 1.0 1440 < th dose dependent rect. 6 11
578 158.01 temperature 25.0 14400 < th dose dependent rect. 14 1
583 158.01 humidity 90.0 14400 > th dose dependent rect. 19 23
678 158.10 humidity 90.0 14400 < th dose independent sin 1 NA
688 158.10 humidity 90.0 14400 < th dose independent rect. 5 21
693 158.11 wind 7.0 4320 > th dose independent rect. 21 1
705 158.11 humidity 90.0 14400 > th dose dependent rect. 21 23
770 158.17 radiation 1.0 14400 < th dose dependent rect. 7 1
803 158.20 precipitation 0.1 14400 < th dose independent rect. 9 7
811 158.20 precipitation 0.1 14400 < th dose dependent rect. 9 7
825 158.22 humidity 90.0 14400 < th dose independent rect. 19 4
829 158.22 humidity 90.0 14400 < th dose independent rect. 17 21
845 158.24 wind 9.0 14400 < th dose independent rect. 5 6
849 158.24 humidity 90.0 14400 < th dose independent rect. 17 19
860 158.25 wind 9.0 4320 > th dose independent rect. 12 1
865 158.25 wind 9.0 14400 > th dose independent rect. 22 14
907 158.29 radiation 1.0 14400 < th dose independent rect. 7 3
914 158.29 humidity 90.0 14400 > th dose dependent rect. 9 1
923 158.30 temperature 20.0 270 > th dose dependent rect. 5 2
927 158.31 wind 9.0 14400 < th dose independent rect. 7 4
929 158.31 humidity 80.0 14400 > th dose independent rect. 10 8
939 158.32 wind 5.0 4320 > th dose independent rect. 20 5
964 158.33 humidity 90.0 14400 < th dose independent rect. 7 23