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Os01g0242700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.43 (0.0234) R2 : 0.108
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.365 (0.0493) R2dN8 : 0.139 R2N8 : 0.108
σ : 0.441
deviance : 89.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.38 0.371 7.36 0.37 0.48 0.244 0.403 2.71 -0.241 16.5 10 4320 -- --
69.91 0.389 7.42 0.419 0.51 0.183 0.493 -- -0.279 16.3 22.16 5809 -- --
63.82 0.372 7.36 0.371 0.48 0.247 -- 2.71 -0.241 16.5 10 4320 -- --
70.31 0.391 7.4 0.426 0.46 0.258 -- -- -0.201 16.7 30.02 7254 -- --
76.31 0.407 7.36 0.371 -- 0.267 -- 2.76 -0.241 -- 10 4320 -- --
71.35 0.396 7.43 0.401 0.493 -- 0.469 -- -0.312 16.3 -- -- -- --
71.92 0.397 7.43 0.405 0.498 -- -- -- -0.309 16.5 -- -- -- --
82.35 0.425 7.43 0.361 -- -0.194 -- -- -0.326 -- 20.34 4334 -- --
74.39 0.402 7.41 -- 0.472 0.288 -- -- -0.235 16.7 32.75 7258 -- --
85.17 0.431 7.42 0.386 -- -- -- -- -0.323 -- -- -- -- --
76.24 0.408 7.44 -- 0.491 -- -- -- -0.355 16.6 -- -- -- --
85.77 0.433 7.43 -- -- -0.21 -- -- -0.366 -- 20.34 4334 -- --
89.09 0.441 7.43 -- -- -- -- -- -0.365 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.98 temperature 25.0 270 < th dose dependent rect. 23 10
3 60.48 temperature 20.0 270 > th dose dependent sin 8 NA
4 60.50 temperature 20.0 270 > th dose dependent rect. 23 11
9 60.77 temperature 20.0 720 > th dose dependent rect. 23 6
10 60.84 temperature 20.0 720 > th dose dependent rect. 21 10
22 61.08 wind 9.0 14400 < th dose independent rect. 9 1
86 61.91 temperature 25.0 270 < th dose dependent sin 7 NA
104 62.07 radiation 10.0 4320 < th dose independent rect. 15 16
108 62.09 humidity 90.0 43200 > th dose independent rect. 5 2
112 62.13 wind 9.0 43200 < th dose independent rect. 24 2
125 62.24 radiation 10.0 4320 < th dose independent rect. 16 14
131 62.26 humidity 90.0 43200 < th dose independent rect. 5 4
138 62.28 wind 9.0 43200 > th dose independent rect. 18 12
142 62.30 wind 9.0 43200 < th dose independent rect. 18 9
153 62.34 wind 9.0 43200 < th dose independent rect. 18 12
167 62.38 wind 9.0 14400 > th dose independent rect. 9 1
169 62.38 temperature 25.0 10 < th dose dependent rect. 24 10
181 62.43 humidity 80.0 43200 > th dose dependent rect. 19 1
183 62.44 radiation 10.0 4320 < th dose independent sin 14 NA
186 62.44 wind 9.0 43200 > th dose independent rect. 18 9
189 62.45 humidity 80.0 43200 > th dose dependent rect. 8 1
196 62.49 wind 9.0 14400 < th dose independent rect. 7 3
199 62.49 temperature 20.0 720 > th dose independent rect. 21 10
205 62.50 humidity 90.0 43200 < th dose independent rect. 4 8
211 62.50 wind 9.0 43200 > th dose dependent rect. 18 12
217 62.52 humidity 90.0 43200 > th dose independent rect. 4 9
227 62.54 temperature 20.0 270 < th dose independent rect. 24 9
240 62.57 humidity 80.0 43200 > th dose dependent rect. 6 5
256 62.60 radiation 1.0 4320 < th dose dependent rect. 2 4
258 62.60 radiation 1.0 4320 < th dose dependent rect. 19 11
264 62.61 radiation 1.0 4320 < th dose dependent rect. 23 7
271 62.62 radiation 1.0 4320 < th dose dependent rect. 4 2
277 62.63 radiation 1.0 4320 < th dose dependent rect. 21 9
282 62.64 temperature 20.0 720 > th dose independent rect. 21 12
295 62.65 radiation 30.0 4320 > th dose dependent rect. 15 17
296 62.66 humidity 90.0 43200 > th dose independent rect. 8 1
297 62.66 radiation 10.0 4320 < th dose independent rect. 16 3
300 62.66 wind 9.0 43200 > th dose independent rect. 18 6
329 62.69 radiation 30.0 4320 < th dose independent rect. 15 17
359 62.74 radiation 1.0 4320 < th dose independent rect. 5 1
363 62.75 temperature 20.0 270 > th dose independent sin 6 NA
366 62.77 radiation 1.0 4320 > th dose independent rect. 5 1
379 62.79 temperature 25.0 270 > th dose independent rect. 23 11
416 62.83 wind 7.0 43200 > th dose dependent rect. 18 9
462 62.90 radiation 1.0 4320 < th dose independent rect. 2 4
472 62.91 humidity 90.0 43200 < th dose independent rect. 4 16
484 62.92 radiation 1.0 4320 < th dose independent rect. 18 12
508 62.96 radiation 1.0 4320 < th dose independent rect. 23 7
525 62.98 radiation 1.0 4320 < th dose independent rect. 21 9
549 62.99 temperature 25.0 720 < th dose dependent rect. 20 10
626 63.06 radiation 30.0 4320 > th dose dependent rect. 15 2
686 63.09 radiation 10.0 4320 > th dose dependent rect. 16 15
687 63.10 humidity 80.0 43200 < th dose independent rect. 18 1
710 63.12 humidity 90.0 43200 > th dose dependent rect. 10 1
711 63.12 precipitation 0.1 14400 > th dose dependent rect. 21 4
715 63.13 humidity 90.0 43200 > th dose independent sin 1 NA
728 63.14 humidity 90.0 43200 < th dose independent sin 1 NA
729 63.14 humidity 90.0 43200 > th dose independent rect. 10 2
731 63.14 radiation 30.0 4320 < th dose independent rect. 15 5
746 63.15 radiation 30.0 4320 < th dose independent rect. 15 3
755 63.15 radiation 1.0 14400 > th dose dependent rect. 18 1
772 63.16 radiation 30.0 4320 < th dose independent rect. 15 9
783 63.16 temperature 20.0 30 > th dose dependent rect. 23 15
800 63.17 humidity 80.0 43200 > th dose dependent rect. 5 17
803 63.18 humidity 80.0 43200 > th dose independent rect. 16 4
807 63.18 radiation 30.0 4320 < th dose independent rect. 15 14
848 63.21 precipitation 0.1 14400 < th dose independent rect. 20 5
852 63.21 radiation 30.0 4320 < th dose independent rect. 15 12
859 63.21 wind 7.0 43200 > th dose dependent rect. 18 3
862 63.21 precipitation 0.1 14400 < th dose dependent rect. 20 5
878 63.22 wind 5.0 43200 > th dose independent rect. 18 21
885 63.23 wind 5.0 43200 > th dose independent rect. 8 4
887 63.23 wind 5.0 43200 > th dose independent rect. 7 6
888 63.23 wind 5.0 43200 < th dose independent rect. 7 6
916 63.24 wind 5.0 43200 < th dose independent rect. 8 4
921 63.24 temperature 25.0 90 > th dose independent rect. 23 15
951 63.26 temperature 20.0 720 > th dose independent sin 9 NA
964 63.27 humidity 80.0 43200 < th dose independent rect. 16 4
968 63.27 wind 5.0 43200 < th dose independent rect. 18 21
978 63.28 precipitation 0.1 14400 > th dose independent rect. 20 5
988 63.28 radiation 10.0 4320 < th dose independent rect. 15 23