Os01g0242600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os01g0242600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.68 | 0.292 | 9.92 | 0.344 | 0.859 | 0.666 | -0.44 | 0.46 | 0.597 | 19.4 | 20.91 | 8 | -- | -- |
| 39.46 | 0.293 | 9.91 | 0.337 | 0.865 | 0.68 | -0.28 | -- | 0.599 | 19.3 | 20.25 | 4 | -- | -- |
| 38.92 | 0.291 | 9.92 | 0.342 | 0.853 | 0.664 | -- | 0.312 | 0.591 | 19.4 | 20.01 | 4 | -- | -- |
| 39.45 | 0.293 | 9.92 | 0.333 | 0.848 | 0.664 | -- | -- | 0.591 | 19.4 | 20 | 4 | -- | -- |
| 70.3 | 0.393 | 9.89 | 0.299 | -- | 0.846 | -- | 0.338 | 0.596 | -- | 9.442 | 6 | -- | -- |
| 47.2 | 0.322 | 9.93 | 0.327 | 1.27 | -- | 0.277 | -- | 0.591 | 21.4 | -- | -- | -- | -- |
| 47.47 | 0.323 | 9.93 | 0.318 | 1.27 | -- | -- | -- | 0.591 | 21.4 | -- | -- | -- | -- |
| 69.77 | 0.389 | 9.9 | 0.283 | -- | 0.866 | -- | -- | 0.591 | -- | 9.758 | 3 | -- | -- |
| 42.38 | 0.303 | 9.93 | -- | 0.841 | 0.662 | -- | -- | 0.559 | 19.5 | 20 | 4 | -- | -- |
| 142.09 | 0.557 | 9.9 | 0.325 | -- | -- | -- | -- | 0.586 | -- | -- | -- | -- | -- |
| 50.13 | 0.331 | 9.94 | -- | 1.27 | -- | -- | -- | 0.556 | 21.4 | -- | -- | -- | -- |
| 71.87 | 0.395 | 9.9 | -- | -- | 0.872 | -- | -- | 0.558 | -- | 10 | 3 | -- | -- |
| 144.87 | 0.562 | 9.9 | -- | -- | -- | -- | -- | 0.55 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 3 | 36.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 19 |
| 4 | 36.26 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 7 | 36.39 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 11 | 36.56 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 12 | 36.57 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 13 | 36.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 6 |
| 19 | 36.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 16 |
| 20 | 36.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 16 |
| 22 | 36.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 23 | 36.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 24 | 36.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 25 | 36.70 | temperature | 15.0 | 90 | > th | dose independent | rect. | 2 | 17 |
| 33 | 36.77 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 35 | 36.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 6 |
| 36 | 36.85 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 6 |
| 38 | 36.87 | radiation | 30.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 40 | 36.91 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 44 | 36.94 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 46 | 36.94 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 49 | 36.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 8 |
| 51 | 36.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 52 | 36.97 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 20 |
| 54 | 36.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 57 | 37.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 6 |
| 58 | 37.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 6 |
| 59 | 37.01 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 62 | 37.02 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 66 | 37.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 6 |
| 67 | 37.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 18 |
| 71 | 37.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 73 | 37.05 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 74 | 37.05 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 6 |
| 78 | 37.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 87 | 37.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 89 | 37.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 91 | 37.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 92 | 37.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 93 | 37.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 94 | 37.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 95 | 37.13 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 96 | 37.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 97 | 37.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 107 | 37.18 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 18 |
| 112 | 37.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 124 | 37.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 126 | 37.25 | radiation | 10.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 128 | 37.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 18 |
| 129 | 37.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 18 |
| 130 | 37.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 18 |
| 131 | 37.27 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 132 | 37.28 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 134 | 37.29 | radiation | 1.0 | 30 | > th | dose independent | sin | 1 | NA |
| 147 | 37.34 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 6 |
| 148 | 37.34 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 163 | 37.39 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 6 |
| 171 | 37.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 177 | 37.43 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 18 | 6 |
| 181 | 37.44 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 184 | 37.45 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 2 | 17 |
| 193 | 37.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 16 |
| 233 | 37.53 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 2 | 17 |
| 251 | 37.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 254 | 37.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 293 | 37.60 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 297 | 37.60 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 309 | 37.63 | wind | 9.0 | 90 | < th | dose independent | rect. | 2 | 17 |
| 317 | 37.64 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 338 | 37.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 349 | 37.69 | radiation | 20.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 365 | 37.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 16 |
| 367 | 37.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 368 | 37.72 | humidity | 70.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 371 | 37.73 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 372 | 37.73 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 385 | 37.74 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 2 | 17 |
| 388 | 37.74 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 393 | 37.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 394 | 37.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 395 | 37.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 396 | 37.76 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 398 | 37.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 402 | 37.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 403 | 37.76 | radiation | 20.0 | 90 | < th | dose independent | rect. | 2 | 17 |
| 409 | 37.77 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 2 | 8 |
| 441 | 37.79 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 13 | 7 |
| 460 | 37.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 461 | 37.80 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 499 | 37.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 557 | 37.95 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 559 | 37.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 8 |
| 561 | 37.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 588 | 37.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 596 | 37.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 601 | 37.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 604 | 38.00 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 615 | 38.01 | radiation | 1.0 | 270 | > th | dose independent | sin | 17 | NA |
| 616 | 38.01 | radiation | 40.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 626 | 38.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 636 | 38.03 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 4 |
| 648 | 38.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 14 |
| 659 | 38.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 716 | 38.13 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 728 | 38.13 | radiation | 40.0 | 90 | < th | dose independent | rect. | 2 | 17 |
| 792 | 38.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 813 | 38.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 7 |
| 816 | 38.21 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 7 |
| 820 | 38.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 823 | 38.21 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 826 | 38.21 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 844 | 38.22 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 920 | 38.30 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 1 |