Os01g0242400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lateral organ boundaries, LOB domain containing protein.
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Os01g0242400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lateral organ boundaries, LOB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.57 | 0.392 | 3.29 | 0.205 | 0.243 | 0.0636 | -0.443 | 2.58 | 0.117 | 7.76 | 40.26 | 282 | -- | -- |
| 73.99 | 0.401 | 3.3 | 0.15 | 0.254 | 0.0957 | -0.425 | -- | 0.0836 | 7.09 | 40.29 | 867 | -- | -- |
| 70.1 | 0.39 | 3.29 | 0.19 | 0.25 | 0.102 | -- | 2.54 | 0.115 | 7.34 | 40.28 | 282 | -- | -- |
| 74.44 | 0.402 | 3.3 | 0.137 | 0.268 | 0.0976 | -- | -- | 0.0913 | 7.6 | 40 | 870 | -- | -- |
| 73.31 | 0.399 | 3.3 | 0.189 | -- | 0.0261 | -- | 2.48 | 0.117 | -- | 40.28 | 282 | -- | -- |
| 74.38 | 0.404 | 3.3 | 0.163 | 0.228 | -- | -0.521 | -- | 0.102 | 7.04 | -- | -- | -- | -- |
| 74.99 | 0.406 | 3.3 | 0.155 | 0.228 | -- | -- | -- | 0.104 | 7.71 | -- | -- | -- | -- |
| 75.34 | 0.404 | 3.31 | 0.221 | -- | -0.22 | -- | -- | 0.092 | -- | 1.168 | 2305 | -- | -- |
| 74.81 | 0.403 | 3.3 | -- | 0.311 | 0.151 | -- | -- | 0.0495 | 7.46 | 40 | 870 | -- | -- |
| 77.8 | 0.412 | 3.3 | 0.157 | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
| 75.62 | 0.407 | 3.3 | -- | 0.229 | -- | -- | -- | 0.0864 | 7.66 | -- | -- | -- | -- |
| 75.52 | 0.405 | 3.3 | -- | -- | -0.369 | -- | -- | 0.139 | -- | 1.05 | 2318 | -- | -- |
| 78.45 | 0.413 | 3.31 | -- | -- | -- | -- | -- | 0.0895 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.36 | humidity | 50 | 90 | < th | dose independent | rect. | 12 | 1 |
| 5 | 64.36 | humidity | 50 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 64.36 | humidity | 50 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 139 | 64.47 | humidity | 50 | 10 | < th | dose independent | rect. | 13 | 5 |
| 157 | 64.47 | humidity | 50 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 337 | 65.25 | humidity | 50 | 30 | < th | dose dependent | sin | 7 | NA |
| 355 | 65.61 | humidity | 50 | 10 | < th | dose dependent | sin | 12 | NA |
| 359 | 65.91 | humidity | 50 | 10 | < th | dose independent | sin | 13 | NA |
| 385 | 66.70 | humidity | 90 | 90 | < th | dose independent | rect. | 2 | 6 |
| 426 | 67.01 | humidity | 50 | 10 | > th | dose independent | sin | 13 | NA |
| 430 | 67.15 | radiation | 10 | 30 | > th | dose independent | rect. | 7 | 1 |
| 432 | 67.39 | humidity | 80 | 10 | < th | dose independent | rect. | 6 | 2 |
| 457 | 67.60 | humidity | 80 | 10 | < th | dose independent | rect. | 23 | 9 |
| 599 | 68.16 | radiation | 10 | 10 | > th | dose independent | rect. | 16 | 16 |
| 605 | 68.34 | radiation | 40 | 90 | > th | dose independent | rect. | 12 | 23 |
| 608 | 68.48 | humidity | 90 | 30 | < th | dose dependent | rect. | 2 | 6 |
| 620 | 68.65 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 1 |
| 637 | 68.85 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 674 | 69.24 | radiation | 40 | 90 | > th | dose independent | rect. | 12 | 2 |
| 698 | 69.33 | radiation | 40 | 270 | < th | dose independent | rect. | 7 | 22 |
| 700 | 69.38 | radiation | 40 | 90 | > th | dose independent | sin | 13 | NA |
| 701 | 69.38 | atmosphere | 995 | 30 | > th | dose independent | rect. | 8 | 22 |
| 702 | 69.40 | humidity | 50 | 90 | < th | dose independent | sin | 7 | NA |
| 704 | 69.40 | radiation | 40 | 270 | > th | dose independent | rect. | 8 | 6 |
| 757 | 69.44 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 6 | 2 |
| 758 | 69.44 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 6 | 2 |
| 802 | 69.51 | radiation | 40 | 270 | > th | dose independent | sin | 4 | NA |
| 810 | 69.53 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 7 | 1 |
| 814 | 69.55 | humidity | 50 | 30 | > th | dose independent | rect. | 8 | 22 |
| 841 | 69.61 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 842 | 69.62 | wind | 1 | 90 | > th | dose independent | rect. | 6 | 2 |
| 865 | 69.64 | radiation | 40 | 270 | > th | dose independent | no | NA | NA |