Os01g0240700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os01g0240700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 197.77 | 0.661 | 7.53 | 0.967 | 0.345 | -1.98 | 1.62 | 1.78 | 0.746 | 5.96 | 22.94 | 4307 | -- | -- |
| 199.69 | 0.658 | 7.59 | 0.582 | 0.348 | -1.88 | 1.79 | -- | 0.655 | 5.57 | 22.47 | 4319 | -- | -- |
| 203.87 | 0.665 | 7.52 | 1.06 | 0.36 | -1.98 | -- | 2.09 | 0.735 | 6.66 | 23.18 | 4364 | -- | -- |
| 205.22 | 0.667 | 7.57 | 0.585 | 0.356 | -1.91 | -- | -- | 0.723 | 6.7 | 21.2 | 4358 | -- | -- |
| 209.17 | 0.674 | 7.55 | 0.959 | -- | -1.93 | -- | 1.88 | 0.662 | -- | 23.78 | 4785 | -- | -- |
| 304.63 | 0.818 | 7.65 | -0.255 | 0.314 | -- | 1.45 | -- | 0.353 | 6.71 | -- | -- | -- | -- |
| 308.99 | 0.823 | 7.65 | -0.227 | 0.338 | -- | -- | -- | 0.352 | 8.15 | -- | -- | -- | -- |
| 210.27 | 0.675 | 7.58 | 0.623 | -- | -1.89 | -- | -- | 0.739 | -- | 21.01 | 4805 | -- | -- |
| 211.38 | 0.677 | 7.6 | -- | 0.366 | -1.71 | -- | -- | 0.53 | 7.21 | 22.92 | 4429 | -- | -- |
| 315.27 | 0.83 | 7.66 | -0.224 | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
| 310.34 | 0.824 | 7.65 | -- | 0.337 | -- | -- | -- | 0.377 | 8.2 | -- | -- | -- | -- |
| 213.29 | 0.68 | 7.59 | -- | -- | -1.76 | -- | -- | 0.705 | -- | 21.34 | 2057 | -- | -- |
| 316.59 | 0.831 | 7.66 | -- | -- | -- | -- | -- | 0.381 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 193.70 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 2 | 194.66 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 4 | 194.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 6 | 195.07 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 9 | 195.24 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 11 | 195.32 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 26 | 195.92 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 17 |
| 35 | 196.25 | temperature | 25 | 4320 | < th | dose independent | sin | 8 | NA |
| 40 | 196.34 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 48 | 196.45 | temperature | 25 | 4320 | > th | dose dependent | sin | 9 | NA |
| 72 | 196.73 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 19 |
| 75 | 196.76 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 81 | 196.80 | temperature | 20 | 4320 | > th | dose dependent | sin | 12 | NA |
| 83 | 196.81 | temperature | 25 | 4320 | > th | dose independent | sin | 8 | NA |
| 100 | 196.95 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 4 |
| 124 | 197.10 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 127 | 197.12 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 142 | 197.20 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 11 |
| 178 | 197.40 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 187 | 197.43 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 195 | 197.48 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 223 | 197.63 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 261 | 197.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 16 |
| 292 | 197.96 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 15 |
| 332 | 198.11 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 480 | 198.61 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 484 | 198.62 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 505 | 198.70 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 6 |
| 637 | 199.01 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 758 | 199.31 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 771 | 199.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 831 | 199.49 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 868 | 199.55 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 895 | 199.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 896 | 199.61 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 915 | 199.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 939 | 199.70 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 966 | 199.73 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 988 | 199.76 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 23 |