Os01g0240200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0240200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.16 | 0.658 | 3.81 | 0.532 | 0.307 | 1.23 | 0.00978 | 1.23 | 0.0624 | 2.54 | 24.11 | 973 | -- | -- |
| 197.75 | 0.655 | 3.79 | 0.729 | 0.304 | 1.08 | -0.168 | -- | 0.116 | 2.2 | 24.92 | 910 | -- | -- |
| 196.16 | 0.652 | 3.81 | 0.532 | 0.308 | 1.23 | -- | 1.22 | 0.0637 | 2.57 | 24.17 | 982 | -- | -- |
| 197.85 | 0.655 | 3.79 | 0.726 | 0.304 | 1.07 | -- | -- | 0.111 | 2.32 | 24.9 | 910 | -- | -- |
| 201.45 | 0.661 | 3.82 | 0.528 | -- | 1.13 | -- | 1.17 | 0.0487 | -- | 23.9 | 982 | -- | -- |
| 214.36 | 0.686 | 3.83 | 0.416 | 0.224 | -- | -0.157 | -- | -0.112 | 4.08 | -- | -- | -- | -- |
| 214.43 | 0.686 | 3.83 | 0.418 | 0.223 | -- | -- | -- | -0.111 | 4.07 | -- | -- | -- | -- |
| 202.94 | 0.663 | 3.79 | 0.702 | -- | 0.955 | -- | -- | 0.0875 | -- | 24.51 | 831 | -- | -- |
| 209.92 | 0.675 | 3.82 | -- | 0.285 | 0.739 | -- | -- | -0.0275 | 2.71 | 25 | 886 | -- | -- |
| 217.15 | 0.689 | 3.83 | 0.427 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 219.04 | 0.692 | 3.84 | -- | 0.231 | -- | -- | -- | -0.158 | 4.04 | -- | -- | -- | -- |
| 212.38 | 0.679 | 3.82 | -- | -- | 0.708 | -- | -- | -0.0309 | -- | 29.43 | 334 | -- | -- |
| 221.97 | 0.695 | 3.85 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.50 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 4 | 190.59 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 6 | 190.85 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 7 | 191.01 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 8 | 191.04 | wind | 5.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 10 | 191.04 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 12 | 191.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 16 | 191.10 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 20 | 191.10 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 22 | 191.10 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 27 | 191.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 28 | 191.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 29 | 191.10 | wind | 9.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 30 | 191.10 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 35 | 191.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 37 | 191.16 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 65 | 191.20 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 68 | 191.23 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 75 | 191.27 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 81 | 191.35 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 89 | 191.44 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 90 | 191.48 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 105 | 192.03 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 113 | 192.81 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 120 | 193.82 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 146 | 193.82 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 175 | 194.05 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 178 | 194.35 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 182 | 195.05 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 193 | 195.45 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 200 | 195.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 208 | 195.75 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 209 | 195.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 217 | 195.83 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 220 | 195.83 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 221 | 195.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 223 | 195.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 227 | 195.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 228 | 195.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 229 | 195.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 232 | 195.92 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 239 | 195.99 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 13 |
| 244 | 196.05 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 245 | 196.05 | temperature | 25.0 | 720 | < th | dose dependent | sin | 3 | NA |
| 254 | 196.16 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 264 | 196.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 271 | 196.34 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 286 | 196.43 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 6 |
| 291 | 196.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 292 | 196.45 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 293 | 196.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 297 | 196.47 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 300 | 196.49 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 325 | 196.64 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 335 | 196.68 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 13 |
| 352 | 196.76 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 372 | 196.80 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 482 | 197.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 5 |
| 495 | 197.22 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 593 | 197.53 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 607 | 197.54 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 611 | 197.56 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 617 | 197.58 | temperature | 10.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 624 | 197.58 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 625 | 197.59 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 628 | 197.59 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 634 | 197.61 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 704 | 197.79 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 745 | 197.90 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 16 |
| 763 | 197.93 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 783 | 197.98 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 811 | 198.04 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 818 | 198.06 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 829 | 198.08 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 890 | 198.22 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 948 | 198.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 975 | 198.36 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 8 |