Os01g0239200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phophate translocator (Fragment).
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Os01g0239200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phophate translocator (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.02 | 0.339 | 14.5 | -1.48 | 0.54 | -0.759 | -0.0936 | 0.103 | -0.626 | 20.2 | 29.33 | 126 | -- | -- |
| 51.99 | 0.336 | 14.5 | -1.46 | 0.528 | -0.759 | -0.0945 | -- | -0.619 | 20.2 | 29.3 | 139 | -- | -- |
| 52.03 | 0.336 | 14.5 | -1.48 | 0.539 | -0.761 | -- | 0.0964 | -0.625 | 20.2 | 29.3 | 129 | -- | -- |
| 52.01 | 0.336 | 14.5 | -1.46 | 0.529 | -0.765 | -- | -- | -0.623 | 20.2 | 29.28 | 145 | -- | -- |
| 61.67 | 0.366 | 14.4 | -1.6 | -- | -1.15 | -- | 0.397 | -0.661 | -- | 40.59 | 477 | -- | -- |
| 59.79 | 0.362 | 14.4 | -1.27 | 0.645 | -- | -0.196 | -- | -0.467 | 18.8 | -- | -- | -- | -- |
| 59.88 | 0.362 | 14.4 | -1.27 | 0.644 | -- | -- | -- | -0.468 | 18.8 | -- | -- | -- | -- |
| 61.78 | 0.366 | 14.4 | -1.53 | -- | -1.14 | -- | -- | -0.643 | -- | 81.15 | 479 | -- | -- |
| 101.96 | 0.47 | 14.4 | -- | 0.632 | -0.122 | -- | -- | -0.347 | 18.9 | 29.51 | 134 | -- | -- |
| 81.61 | 0.422 | 14.4 | -1.28 | -- | -- | -- | -- | -0.48 | -- | -- | -- | -- | -- |
| 102.21 | 0.473 | 14.4 | -- | 0.66 | -- | -- | -- | -0.327 | 18.7 | -- | -- | -- | -- |
| 118.66 | 0.507 | 14.4 | -- | -- | -0.621 | -- | -- | -0.41 | -- | 63.35 | 393 | -- | -- |
| 124.92 | 0.522 | 14.4 | -- | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.35 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 3 | 47.06 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 23 | 48.32 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 31 | 48.61 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 35 | 48.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 50 | 49.15 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 51 | 49.15 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 52 | 49.15 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 53 | 49.18 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 62 | 49.27 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 64 | 49.29 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 76 | 49.37 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 90 | 49.51 | temperature | 30.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 94 | 49.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 11 |
| 96 | 49.56 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 99 | 49.58 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 102 | 49.61 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 109 | 49.65 | temperature | 15.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 121 | 49.74 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 125 | 49.78 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 12 |
| 138 | 49.85 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 165 | 50.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 167 | 50.01 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 200 | 50.18 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 201 | 50.18 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 210 | 50.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 218 | 50.27 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 222 | 50.29 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 237 | 50.33 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 256 | 50.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 263 | 50.43 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 265 | 50.44 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 268 | 50.45 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 284 | 50.52 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 291 | 50.53 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 294 | 50.55 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 297 | 50.56 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 315 | 50.60 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 324 | 50.62 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 335 | 50.64 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 348 | 50.67 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 382 | 50.74 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 388 | 50.75 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 389 | 50.75 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 392 | 50.76 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 474 | 50.85 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 482 | 50.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 489 | 50.86 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 508 | 50.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 513 | 50.88 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 537 | 50.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 544 | 50.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 584 | 50.95 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 17 | 15 |
| 615 | 50.98 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 616 | 50.99 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 620 | 50.99 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 19 | 13 |
| 622 | 50.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 630 | 51.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 648 | 51.02 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 662 | 51.04 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 710 | 51.08 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 741 | 51.11 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 763 | 51.13 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 776 | 51.14 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 786 | 51.16 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 813 | 51.18 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 830 | 51.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 832 | 51.20 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 862 | 51.22 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 870 | 51.23 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 877 | 51.24 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 887 | 51.25 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 904 | 51.26 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 916 | 51.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 934 | 51.27 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 13 | 19 |
| 935 | 51.28 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 968 | 51.30 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 990 | 51.32 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 1 |