Os01g0238400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0238400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 333.84 | 0.858 | 14.6 | 0.131 | 0.63 | 0.106 | 0.818 | 3.54 | -0.64 | 8.91 | 49.68 | 4370 | -- | -- |
| 337.32 | 0.855 | 14.8 | -0.0487 | 0.693 | 1.44 | 0.758 | -- | -0.646 | 8.65 | 42.31 | 5568 | -- | -- |
| 336.09 | 0.854 | 14.6 | 0.159 | 0.625 | 0.118 | -- | 3.46 | -0.639 | 8.98 | 49.38 | 4375 | -- | -- |
| 338.69 | 0.857 | 14.7 | -0.133 | 0.645 | 1.52 | -- | -- | -0.669 | 8.91 | 43.99 | 5583 | -- | -- |
| 358.51 | 0.882 | 14.6 | 0.218 | -- | 0.0341 | -- | 3.62 | -0.619 | -- | 49 | 4376 | -- | -- |
| 374.57 | 0.907 | 14.7 | 0.371 | 0.615 | -- | 0.668 | -- | -0.708 | 8.78 | -- | -- | -- | -- |
| 376.04 | 0.908 | 14.7 | 0.394 | 0.612 | -- | -- | -- | -0.707 | 8.9 | -- | -- | -- | -- |
| 359.96 | 0.884 | 14.7 | 0.0668 | -- | 1.28 | -- | -- | -0.553 | -- | 39.04 | 10022 | -- | -- |
| 339.08 | 0.858 | 14.7 | -- | 0.633 | 1.45 | -- | -- | -0.651 | 8.91 | 43.91 | 5583 | -- | -- |
| 397.43 | 0.932 | 14.8 | 0.394 | -- | -- | -- | -- | -0.703 | -- | -- | -- | -- | -- |
| 380.14 | 0.912 | 14.8 | -- | 0.613 | -- | -- | -- | -0.751 | 8.85 | -- | -- | -- | -- |
| 359.13 | 0.883 | 14.7 | -- | -- | 1.28 | -- | -- | -0.628 | -- | 40 | 10022 | -- | -- |
| 401.53 | 0.935 | 14.8 | -- | -- | -- | -- | -- | -0.747 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 299.80 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 2 | 300.82 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 5 | 304.59 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 7 | 305.04 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 18 | 307.86 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 20 | 308.14 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 25 | 308.91 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 33 | 309.65 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 38 | 309.85 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 40 | 309.88 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 46 | 310.33 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 55 | 310.88 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 70 | 311.53 | wind | 3 | 14400 | < th | dose independent | sin | 6 | NA |
| 76 | 311.78 | wind | 5 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 112 | 312.81 | wind | 3 | 14400 | > th | dose independent | sin | 6 | NA |
| 113 | 312.82 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 136 | 313.36 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 174 | 314.44 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 195 | 315.06 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 196 | 315.06 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 202 | 315.20 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 205 | 315.27 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 209 | 315.33 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 232 | 315.73 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 250 | 316.16 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 257 | 316.26 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 269 | 316.51 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 272 | 316.55 | wind | 3 | 14400 | < th | dose dependent | sin | 6 | NA |
| 293 | 316.88 | wind | 5 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 336 | 317.58 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 337 | 317.58 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 375 | 318.05 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 376 | 318.08 | wind | 5 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 387 | 318.19 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 399 | 318.41 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 590 | 320.65 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 662 | 321.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 676 | 321.60 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 691 | 321.73 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 703 | 321.89 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 748 | 322.45 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 752 | 322.49 | wind | 3 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 768 | 322.64 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 774 | 322.70 | wind | 9 | 14400 | < th | dose dependent | rect. | 23 | 14 |
| 788 | 322.83 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 794 | 322.90 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 801 | 322.98 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 823 | 323.21 | wind | 9 | 14400 | < th | dose independent | sin | 5 | NA |
| 898 | 323.81 | wind | 9 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 975 | 324.40 | wind | 1 | 14400 | > th | dose dependent | sin | 6 | NA |
| 990 | 324.53 | wind | 9 | 14400 | < th | dose dependent | sin | 6 | NA |