Os01g0238200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0238200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.92 | 0.364 | 11.7 | 0.31 | 0.989 | -2.1 | 0.223 | -4.21 | 0.469 | 1.89 | 21.2 | 6084 | -- | -- |
| 64.93 | 0.375 | 11.8 | 0.251 | 0.965 | -0.56 | 0.202 | -- | 0.464 | 1.8 | 36.28 | 5353 | -- | -- |
| 59.83 | 0.36 | 11.6 | 0.224 | 1.02 | -2.65 | -- | -5.28 | 0.463 | 1.84 | 20.15 | 6037 | -- | -- |
| 64.51 | 0.374 | 11.8 | 0.214 | 0.985 | -0.623 | -- | -- | 0.413 | 1.84 | 25.66 | 4786 | -- | -- |
| 117.28 | 0.504 | 11.6 | 0.302 | -- | -2.72 | -- | -5.46 | 0.477 | -- | 20.23 | 5313 | -- | -- |
| 70.26 | 0.393 | 11.7 | 0.545 | 0.999 | -- | 0.239 | -- | 0.577 | 1.88 | -- | -- | -- | -- |
| 70.48 | 0.393 | 11.7 | 0.537 | 0.998 | -- | -- | -- | 0.576 | 1.86 | -- | -- | -- | -- |
| 113.24 | 0.496 | 11.8 | 0.278 | -- | -1.03 | -- | -- | 0.423 | -- | 74.89 | 1055 | -- | -- |
| 64.06 | 0.373 | 11.8 | -- | 0.984 | -0.649 | -- | -- | 0.335 | 1.85 | 38.38 | 36322 | -- | -- |
| 130.8 | 0.534 | 11.7 | 0.579 | -- | -- | -- | -- | 0.599 | -- | -- | -- | -- | -- |
| 78.1 | 0.413 | 11.8 | -- | 1.01 | -- | -- | -- | 0.516 | 1.88 | -- | -- | -- | -- |
| 115.03 | 0.5 | 11.8 | -- | -- | -1.14 | -- | -- | 0.377 | -- | 82.51 | 1058 | -- | -- |
| 139.63 | 0.552 | 11.7 | -- | -- | -- | -- | -- | 0.535 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.25 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 2 | 57.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 8 |
| 6 | 57.38 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 24 | 58.03 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 39 | 58.53 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 45 | 58.57 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 7 |
| 56 | 58.67 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 4 |
| 65 | 58.74 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 3 |
| 67 | 58.75 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 82 | 58.86 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 84 | 58.88 | temperature | 25 | 720 | < th | dose independent | rect. | 20 | 1 |
| 92 | 58.92 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 95 | 58.93 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 97 | 58.94 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 9 |
| 104 | 58.98 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 127 | 59.17 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 128 | 59.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 133 | 59.22 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 3 |
| 164 | 59.30 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 171 | 59.31 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 220 | 59.42 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 245 | 59.45 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 8 |
| 256 | 59.52 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 257 | 59.52 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 261 | 59.55 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 289 | 59.66 | humidity | 70 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 356 | 59.75 | temperature | 25 | 720 | < th | dose independent | sin | 14 | NA |
| 369 | 59.78 | humidity | 70 | 14400 | < th | dose dependent | rect. | 20 | 13 |
| 375 | 59.82 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 378 | 59.82 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 379 | 59.82 | humidity | 70 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 401 | 59.86 | temperature | 20 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 405 | 59.87 | humidity | 50 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 406 | 59.87 | humidity | 50 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 449 | 59.92 | temperature | 20 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 468 | 59.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 472 | 59.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 473 | 59.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 492 | 59.97 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 5 |
| 505 | 60.01 | radiation | 1 | 1440 | > th | dose independent | sin | 18 | NA |
| 516 | 60.02 | radiation | 1 | 1440 | < th | dose independent | sin | 18 | NA |
| 529 | 60.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 560 | 60.07 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 601 | 60.13 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 614 | 60.15 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 629 | 60.16 | humidity | 50 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 631 | 60.16 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 638 | 60.17 | humidity | 60 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 668 | 60.20 | temperature | 25 | 720 | > th | dose independent | sin | 14 | NA |
| 841 | 60.39 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 869 | 60.45 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 951 | 60.53 | humidity | 60 | 43200 | < th | dose dependent | sin | 7 | NA |