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Os01g0236000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.27 (0.0203) R2 : 0.68
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.64 (0.0527) R2dC : 0.682 R2C : 0.675
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.106 (0.0426) R2dN8 : 0.00562 R2N8 : -0.00183
σ : 0.382
deviance : 66.66
__
_____
C
peak time of C : 7.03
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.31 0.34 8.27 0.338 1.89 0.5 -1.37 -0.691 -0.132 6.92 40 679 -- --
52.8 0.338 8.27 0.382 1.9 0.477 -1.2 -- -0.116 6.95 40 697 -- --
56.29 0.349 8.27 0.35 1.89 0.496 -- 0.127 -0.122 6.88 40 697 -- --
56.26 0.349 8.27 0.359 1.91 0.524 -- -- -0.118 6.86 40 697 -- --
195.14 0.654 8.29 0.458 -- 0.607 -- -1.42 -0.0142 -- 40 3022 -- --
57.89 0.357 8.26 0.404 1.63 -- -1.4 -- -0.0667 7.14 -- -- -- --
62.98 0.372 8.26 0.374 1.63 -- -- -- -0.0645 7.04 -- -- -- --
197.1 0.657 8.3 0.436 -- 0.716 -- -- -0.0205 -- 40 3022 -- --
59.52 0.359 8.27 -- 1.93 0.531 -- -- -0.153 6.83 40 679 -- --
203.68 0.667 8.3 0.406 -- -- -- -- -0.0348 -- -- -- -- --
66.66 0.382 8.27 -- 1.64 -- -- -- -0.106 7.03 -- -- -- --
202.11 0.664 8.31 -- -- 0.678 -- -- -0.0695 -- 40 3022 -- --
208.04 0.673 8.31 -- -- -- -- -- -0.0799 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.30 temperature 30.0 720 < th dose dependent rect. 24 4
10 45.19 radiation 30.0 720 < th dose independent rect. 5 4
11 45.24 humidity 50.0 270 > th dose independent rect. 12 13
13 45.40 radiation 30.0 720 < th dose independent rect. 21 12
20 45.93 radiation 1.0 720 < th dose dependent rect. 24 6
21 45.97 temperature 30.0 90 < th dose independent rect. 13 14
30 46.24 radiation 40.0 720 < th dose independent rect. 20 14
38 46.38 humidity 50.0 720 > th dose independent rect. 12 5
40 46.43 temperature 30.0 270 < th dose dependent rect. 1 11
45 46.57 radiation 40.0 720 < th dose independent rect. 5 12
53 46.67 humidity 60.0 90 > th dose independent rect. 6 12
54 46.69 atmosphere 1010.0 30 < th dose independent rect. 6 12
63 46.85 temperature 20.0 720 < th dose independent rect. 1 2
65 46.89 temperature 20.0 720 < th dose independent rect. 24 4
68 46.93 radiation 1.0 720 < th dose dependent rect. 24 9
69 46.95 radiation 40.0 720 < th dose independent rect. 21 20
72 47.00 humidity 50.0 720 > th dose independent rect. 5 19
81 47.10 temperature 15.0 720 > th dose independent rect. 4 5
95 47.28 temperature 15.0 90 > th dose independent rect. 6 11
109 47.42 wind 7.0 720 < th dose independent rect. 24 5
110 47.43 temperature 30.0 720 < th dose independent rect. 4 5
121 47.52 temperature 10.0 720 > th dose independent rect. 12 5
122 47.52 atmosphere 1015.0 720 < th dose independent rect. 12 5
124 47.52 temperature 10.0 720 > th dose independent rect. 17 19
130 47.55 radiation 40.0 30 < th dose independent rect. 6 12
132 47.56 temperature 10.0 720 > th dose independent rect. 24 5
133 47.56 temperature 30.0 720 < th dose independent rect. 24 5
134 47.56 humidity 50.0 720 > th dose independent rect. 24 5
137 47.56 atmosphere 995.0 720 > th dose independent rect. 24 5
138 47.56 radiation 20.0 720 < th dose independent rect. 24 5
141 47.56 temperature 10.0 270 > th dose independent rect. 1 11
142 47.56 atmosphere 995.0 270 > th dose independent rect. 1 11
143 47.56 atmosphere 1015.0 270 < th dose independent rect. 1 11
144 47.56 temperature 10.0 270 > th dose independent rect. 12 13
145 47.56 temperature 10.0 720 > th dose independent rect. 5 19
149 47.57 radiation 20.0 720 < th dose dependent rect. 24 5
160 47.62 radiation 1.0 720 < th dose independent rect. 24 5
170 47.70 temperature 25.0 10 < th dose independent rect. 13 14
172 47.71 temperature 30.0 720 < th dose independent rect. 12 4
174 47.72 temperature 15.0 720 > th dose independent rect. 6 1
178 47.74 humidity 50.0 720 > th dose independent rect. 12 21
196 47.79 radiation 40.0 720 < th dose dependent rect. 6 1
203 47.82 temperature 30.0 30 < th dose independent rect. 6 12
207 47.85 radiation 40.0 720 < th dose independent rect. 13 11
219 47.92 precipitation 0.1 720 < th dose independent rect. 21 19
220 47.92 precipitation 0.1 720 < th dose dependent rect. 21 19
223 47.93 wind 9.0 270 < th dose independent rect. 12 13
224 47.95 humidity 50.0 720 > th dose dependent rect. 24 5
225 47.96 precipitation 0.1 720 < th dose independent rect. 4 5
226 47.96 precipitation 0.1 720 < th dose dependent rect. 4 5
227 47.97 humidity 50.0 270 > th dose independent rect. 1 11
231 47.98 wind 9.0 90 < th dose independent rect. 6 11
235 47.99 precipitation 0.1 270 < th dose independent rect. 1 11
237 47.99 precipitation 0.1 270 < th dose dependent rect. 1 11
238 48.00 radiation 40.0 720 < th dose dependent rect. 5 4
239 48.01 wind 9.0 10 < th dose independent rect. 6 12
248 48.03 wind 9.0 720 < th dose independent rect. 17 19
249 48.04 temperature 30.0 720 < th dose independent rect. 13 2
254 48.05 wind 9.0 720 < th dose independent rect. 16 5
261 48.07 wind 1.0 10 > th dose independent rect. 6 12
273 48.14 atmosphere 995.0 30 > th dose independent rect. 6 12
274 48.15 temperature 10.0 720 > th dose independent rect. 16 5
275 48.15 radiation 40.0 720 < th dose independent rect. 16 5
280 48.15 temperature 10.0 720 > th dose independent rect. 21 19
281 48.16 temperature 10.0 720 > th dose independent rect. 14 10
284 48.16 temperature 10.0 720 > th dose independent rect. 24 14
285 48.16 atmosphere 995.0 720 > th dose independent rect. 24 14
287 48.17 wind 9.0 720 < th dose independent rect. 4 5
289 48.17 humidity 50.0 720 > th dose independent rect. 4 5
290 48.17 atmosphere 995.0 720 > th dose independent rect. 4 5
291 48.17 atmosphere 1015.0 720 < th dose independent rect. 4 5
294 48.17 temperature 10.0 720 > th dose independent rect. 9 19
299 48.19 wind 9.0 270 < th dose independent rect. 1 11
306 48.21 temperature 30.0 720 < th dose independent rect. 21 12
310 48.22 wind 9.0 720 < th dose independent rect. 17 11
319 48.25 wind 9.0 720 < th dose independent rect. 12 5
323 48.26 precipitation 0.1 720 < th dose independent rect. 21 10
324 48.26 wind 7.0 30 < th dose independent rect. 18 12
326 48.26 precipitation 0.1 720 < th dose dependent rect. 21 10
327 48.27 temperature 15.0 720 > th dose independent rect. 21 10
329 48.27 temperature 30.0 720 < th dose independent rect. 20 14
331 48.28 precipitation 0.1 90 < th dose independent rect. 17 13
333 48.28 precipitation 0.1 90 < th dose dependent rect. 17 13
335 48.29 temperature 15.0 30 > th dose independent rect. 18 12
354 48.33 wind 9.0 720 < th dose independent rect. 21 19
357 48.34 temperature 15.0 720 > th dose independent rect. 21 12
358 48.34 wind 9.0 720 < th dose independent rect. 16 13
359 48.34 atmosphere 995.0 720 > th dose independent rect. 17 19
361 48.34 radiation 30.0 30 < th dose dependent rect. 18 12
363 48.35 precipitation 0.1 720 < th dose independent rect. 12 5
366 48.35 precipitation 0.1 720 < th dose dependent rect. 12 5
373 48.36 precipitation 0.1 720 < th dose independent rect. 24 5
376 48.36 precipitation 0.1 720 < th dose dependent rect. 24 5
379 48.37 temperature 25.0 720 < th dose dependent sin 8 NA
383 48.38 precipitation 0.1 720 < th dose independent rect. 21 12
384 48.38 precipitation 0.1 720 < th dose dependent rect. 21 12
385 48.39 wind 1.0 270 > th dose independent rect. 16 12
389 48.39 humidity 50.0 30 > th dose independent rect. 18 12
391 48.39 radiation 20.0 30 < th dose independent rect. 18 12
402 48.40 atmosphere 1015.0 720 < th dose independent rect. 3 14
406 48.41 atmosphere 995.0 30 > th dose independent rect. 18 12
412 48.42 temperature 10.0 720 > th dose independent rect. 17 11
413 48.42 radiation 30.0 720 < th dose independent rect. 17 11
439 48.45 atmosphere 1015.0 720 < th dose independent rect. 5 11
441 48.45 temperature 10.0 720 > th dose independent rect. 16 13
442 48.45 radiation 40.0 720 < th dose independent rect. 16 13
444 48.45 radiation 40.0 720 < th dose independent rect. 5 19
450 48.46 precipitation 0.1 10 < th dose independent rect. 6 12
454 48.46 precipitation 0.1 10 < th dose dependent rect. 6 12
467 48.49 atmosphere 995.0 270 > th dose independent rect. 12 13
472 48.49 temperature 30.0 270 < th dose dependent sin 5 NA
474 48.49 humidity 50.0 10 > th dose dependent rect. 6 12
487 48.53 humidity 70.0 720 > th dose independent rect. 6 1
489 48.53 radiation 40.0 720 < th dose dependent rect. 21 11
493 48.54 radiation 40.0 90 < th dose dependent rect. 6 11
494 48.55 wind 7.0 720 < th dose independent rect. 18 1
498 48.56 wind 1.0 720 > th dose independent rect. 16 5
502 48.56 radiation 10.0 720 < th dose dependent rect. 18 1
505 48.58 temperature 15.0 720 > th dose independent rect. 18 1
524 48.63 precipitation 0.1 720 < th dose independent rect. 5 19
525 48.63 precipitation 0.1 720 < th dose dependent rect. 5 19
526 48.64 precipitation 0.1 270 < th dose independent rect. 12 13
531 48.64 precipitation 0.1 270 < th dose dependent rect. 12 13
538 48.68 precipitation 0.1 720 < th dose independent rect. 6 1
542 48.68 radiation 40.0 90 < th dose independent rect. 13 14
546 48.68 precipitation 0.1 720 < th dose dependent rect. 6 1
549 48.69 humidity 50.0 720 > th dose independent rect. 18 1
550 48.69 atmosphere 1015.0 720 < th dose independent rect. 18 1
551 48.69 radiation 10.0 720 < th dose independent rect. 18 1
556 48.69 temperature 10.0 720 > th dose independent rect. 19 23
574 48.71 radiation 40.0 10 < th dose independent rect. 13 14
580 48.72 wind 1.0 720 > th dose independent rect. 9 12
587 48.73 atmosphere 1015.0 720 < th dose independent rect. 21 19
596 48.74 precipitation 0.1 720 < th dose independent rect. 5 11
604 48.74 precipitation 0.1 720 < th dose dependent rect. 5 11
610 48.76 atmosphere 1015.0 720 < th dose independent rect. 16 5
612 48.77 wind 7.0 720 < th dose independent rect. 6 1
615 48.77 temperature 30.0 720 < th dose independent rect. 6 1
616 48.77 humidity 50.0 720 > th dose independent rect. 6 1
618 48.77 atmosphere 995.0 720 > th dose independent rect. 6 1
619 48.77 atmosphere 1015.0 720 < th dose independent rect. 6 1
627 48.77 temperature 15.0 720 > th dose independent rect. 19 14
628 48.77 temperature 10.0 720 > th dose independent rect. 7 23
630 48.77 radiation 40.0 720 < th dose dependent rect. 17 11
640 48.79 atmosphere 995.0 720 > th dose independent rect. 5 11
662 48.84 atmosphere 995.0 720 > th dose independent rect. 21 19
663 48.85 atmosphere 995.0 720 > th dose independent rect. 12 5
680 48.87 humidity 50.0 720 > th dose independent rect. 21 20
694 48.90 precipitation 0.1 720 < th dose independent rect. 18 1
695 48.90 precipitation 0.1 720 < th dose independent rect. 21 3
699 48.90 precipitation 0.1 720 < th dose dependent rect. 18 1
700 48.90 precipitation 0.1 720 < th dose dependent rect. 21 3
715 48.93 precipitation 0.1 720 < th dose independent rect. 4 13
721 48.93 precipitation 0.1 720 < th dose dependent rect. 4 13
728 48.94 radiation 10.0 720 < th dose dependent rect. 18 10
734 48.95 wind 9.0 720 < th dose independent rect. 5 19
740 48.96 precipitation 0.1 720 < th dose independent rect. 16 5
746 48.96 precipitation 0.1 720 < th dose dependent rect. 16 5
777 48.98 temperature 10.0 720 > th dose independent rect. 21 3
778 48.98 temperature 30.0 720 < th dose independent rect. 21 3
779 48.98 humidity 50.0 720 > th dose independent rect. 21 3
782 48.98 atmosphere 995.0 720 > th dose independent rect. 21 3
783 48.98 radiation 1.0 720 < th dose independent rect. 21 3
791 48.98 temperature 10.0 720 > th dose independent rect. 24 21
792 48.98 radiation 1.0 720 < th dose dependent rect. 21 3
801 48.99 temperature 10.0 720 > th dose independent rect. 9 3
802 48.99 atmosphere 995.0 720 > th dose independent rect. 9 3
803 48.99 atmosphere 1015.0 720 < th dose independent rect. 9 3
806 48.99 temperature 10.0 720 > th dose independent rect. 12 21
811 49.00 radiation 40.0 720 < th dose dependent rect. 17 4
817 49.02 wind 1.0 720 > th dose independent rect. 9 3
820 49.02 humidity 70.0 270 > th dose independent rect. 20 12
834 49.05 wind 1.0 720 > th dose independent rect. 18 1
836 49.05 humidity 50.0 720 > th dose independent rect. 18 10
845 49.05 humidity 50.0 90 > th dose dependent rect. 13 14
848 49.06 temperature 15.0 720 > th dose dependent rect. 21 9
850 49.07 wind 9.0 720 < th dose independent rect. 21 3
871 49.10 precipitation 0.1 720 < th dose independent rect. 9 3
873 49.10 temperature 10.0 90 > th dose independent rect. 3 10
874 49.10 atmosphere 995.0 90 > th dose independent rect. 3 10
875 49.10 atmosphere 1015.0 90 < th dose independent rect. 3 10
879 49.10 humidity 50.0 720 > th dose independent rect. 17 19
880 49.10 precipitation 0.1 720 < th dose independent rect. 12 21
882 49.10 precipitation 0.1 720 < th dose dependent rect. 9 3
885 49.10 radiation 40.0 10 < th dose dependent rect. 7 11
886 49.10 precipitation 0.1 720 < th dose dependent rect. 12 21
887 49.11 humidity 50.0 720 > th dose independent rect. 9 3
893 49.11 temperature 30.0 720 < th dose independent rect. 5 19
903 49.13 temperature 10.0 720 > th dose independent rect. 9 12
905 49.13 humidity 50.0 720 > th dose independent rect. 21 12
906 49.13 atmosphere 995.0 720 > th dose independent rect. 21 12
907 49.13 precipitation 0.1 720 < th dose independent rect. 24 14
909 49.13 precipitation 0.1 720 < th dose dependent rect. 24 14
923 49.15 humidity 70.0 720 > th dose independent rect. 21 10
948 49.19 precipitation 0.1 90 < th dose independent rect. 3 10
949 49.19 precipitation 0.1 90 < th dose dependent rect. 3 10
951 49.20 wind 9.0 720 < th dose independent rect. 21 12
967 49.23 wind 1.0 720 > th dose independent rect. 12 5
975 49.24 radiation 40.0 720 < th dose independent sin 7 NA