Os01g0235500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0235500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.39 | 0.541 | 2.86 | -0.0435 | 0.433 | 0.238 | -1.15 | -0.924 | 0.152 | 11.7 | 0.1952 | 89 | -- | -- |
| 133.28 | 0.538 | 2.87 | -0.129 | 0.262 | 0.135 | -0.103 | -- | 0.137 | 11.5 | 0.01932 | 143 | -- | -- |
| 133.14 | 0.542 | 2.88 | -0.131 | 0.0721 | -0.194 | -- | 0.128 | 0.122 | 7.05 | 40.68 | 193 | -- | -- |
| 133.19 | 0.538 | 2.88 | -0.131 | 0.0778 | -0.231 | -- | -- | 0.122 | 7.78 | 116.8 | 4 | -- | -- |
| 133.39 | 0.541 | 2.88 | -0.131 | -- | -0.233 | -- | 0.128 | 0.123 | -- | 51.87 | 70 | -- | -- |
| 133.81 | 0.542 | 2.87 | -0.123 | 0.172 | -- | -0.135 | -- | 0.123 | 10.6 | -- | -- | -- | -- |
| 133.89 | 0.542 | 2.87 | -0.128 | 0.173 | -- | -- | -- | 0.122 | 10.5 | -- | -- | -- | -- |
| 133.32 | 0.54 | 2.88 | -0.136 | -- | -0.225 | -- | -- | 0.123 | -- | 46.97 | 22 | -- | -- |
| 133.64 | 0.538 | 2.87 | -- | 0.0775 | -0.228 | -- | -- | 0.137 | 7.99 | 146.3 | 4 | -- | -- |
| 135.73 | 0.544 | 2.88 | -0.131 | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
| 134.32 | 0.542 | 2.87 | -- | 0.174 | -- | -- | -- | 0.136 | 10.6 | -- | -- | -- | -- |
| 133.81 | 0.541 | 2.87 | -- | -- | -0.224 | -- | -- | 0.138 | -- | 46.97 | 22 | -- | -- |
| 136.18 | 0.545 | 2.87 | -- | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.33 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 3 | 122.73 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 7 | 122.73 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 11 | 122.79 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 12 | 122.82 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 23 | 122.90 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 27 | 123.30 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 31 | 123.63 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 2 |
| 37 | 123.94 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 70 | 124.84 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 106 | 125.86 | humidity | 60.0 | 10 | < th | dose independent | rect. | 18 | 16 |
| 160 | 128.27 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 163 | 128.38 | radiation | 1.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 183 | 128.55 | radiation | 20.0 | 30 | > th | dose independent | rect. | 9 | 2 |
| 197 | 128.74 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 220 | 129.03 | wind | 1.0 | 30 | < th | dose dependent | rect. | 7 | 4 |
| 227 | 129.10 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 246 | 129.11 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 248 | 129.13 | humidity | 60.0 | 10 | < th | dose independent | rect. | 18 | 1 |
| 285 | 129.36 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 309 | 129.52 | wind | 1.0 | 30 | < th | dose independent | rect. | 7 | 4 |
| 317 | 129.55 | temperature | 20.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 322 | 129.59 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 323 | 129.60 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 324 | 129.60 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 337 | 129.66 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 344 | 129.70 | humidity | 80.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 370 | 129.75 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 374 | 129.76 | wind | 1.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 375 | 129.76 | temperature | 10.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 377 | 129.76 | humidity | 50.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 378 | 129.76 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 381 | 129.76 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 384 | 129.76 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 10 | 1 |
| 385 | 129.76 | temperature | 10.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 386 | 129.76 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 387 | 129.77 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 395 | 129.77 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 398 | 129.77 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 411 | 129.79 | wind | 9.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 417 | 129.81 | radiation | 40.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 418 | 129.81 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 431 | 129.85 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 433 | 129.85 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 4 |
| 434 | 129.85 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 4 |
| 458 | 129.90 | temperature | 30.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 463 | 129.91 | humidity | 80.0 | 90 | > th | dose independent | rect. | 10 | 2 |
| 467 | 129.94 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 476 | 129.94 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 481 | 129.94 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 503 | 129.96 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 555 | 130.00 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 576 | 130.00 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 737 | 130.03 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 895 | 130.15 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 897 | 130.16 | radiation | 40.0 | 10 | > th | dose independent | sin | 12 | NA |
| 902 | 130.17 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 11 |
| 906 | 130.17 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 934 | 130.24 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 12 | 1 |