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Os01g0235100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0302) R2 : 0.908
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.21 (0.128) R2dC : 0.344 R2C : 0.722
β3 : -2.52 (0.144) R2dE : 0.175 R2E : 0.561
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.357 (0.0638) R2dN8 : 0.00808 R2N8 : 0.00582
σ : 0.566
deviance : 147.73
__
_____
C
peak time of C : 7.62
E
wheather : temperature
threshold : 20
memory length : 317
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 13.8
open length of G : 5.29

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
134.96 0.546 13 -0.675 3.34 -2.43 0.969 -0.357 -0.414 7.63 20 302 14 5.05
134.87 0.541 13 -0.659 3.32 -2.44 1.16 -- -0.419 7.61 20.06 305 13.9 5.1
136.75 0.545 13 -0.634 3.37 -2.38 -- -0.743 -0.407 7.58 20.08 307 14 5
138.15 0.547 13 -0.629 3.26 -2.47 -- -- -0.396 7.58 20.04 318 13.8 5.22
202.11 0.662 13.1 -0.437 -- -4.42 -- -1.59 -0.25 -- 18.58 268 13.1 8.23
227.21 0.707 13 -0.846 5.03 -- 1.62 -- -0.558 7.37 -- -- -- --
234.27 0.717 13 -0.81 5.03 -- -- -- -0.561 7.35 -- -- -- --
155.34 0.58 13.1 -0.74 -- -5.41 -- -- -0.438 -- -31.07 474 11.2 8.07
147.73 0.566 13 -- 3.21 -2.52 -- -- -0.357 7.62 20 317 13.8 5.29
1579.39 1.86 13.1 -0.726 -- -- -- -- -0.478 -- -- -- -- --
251.58 0.742 13 -- 5.02 -- -- -- -0.471 7.36 -- -- -- --
170.09 0.607 13.1 -- -- -5.4 -- -- -0.363 -- -26.94 474 11.2 8.1
1593.3 1.86 13.1 -- -- -- -- -- -0.397 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 137.00 temperature 20.0 270 > th dose independent rect. 14 5
4 139.79 precipitation 0.1 270 < th dose independent rect. 19 19
5 139.79 precipitation 0.1 270 < th dose dependent rect. 19 19
6 141.05 radiation 40.0 270 < th dose independent rect. 14 5
7 141.77 humidity 50.0 270 > th dose independent rect. 14 5
8 142.44 atmosphere 995.0 270 > th dose independent rect. 14 5
9 142.52 wind 9.0 270 < th dose independent rect. 14 5
10 142.66 temperature 10.0 270 > th dose independent rect. 14 5
12 142.66 atmosphere 1010.0 270 < th dose independent rect. 14 5
14 142.66 temperature 10.0 270 > th dose independent rect. 19 19
15 142.66 atmosphere 995.0 270 > th dose independent rect. 19 19
18 142.70 radiation 1.0 270 > th dose independent rect. 8 6
20 143.00 radiation 1.0 270 > th dose independent rect. 7 8
21 143.13 wind 9.0 270 < th dose independent rect. 19 19
24 143.34 atmosphere 995.0 270 > th dose independent rect. 13 7
25 143.42 wind 9.0 270 < th dose independent rect. 13 7
28 143.64 temperature 10.0 270 > th dose independent rect. 13 7
29 143.64 atmosphere 1015.0 270 < th dose independent rect. 13 7
30 143.64 temperature 10.0 270 > th dose independent rect. 20 17
31 143.64 atmosphere 995.0 270 > th dose independent rect. 20 17
33 143.79 radiation 40.0 270 < th dose independent rect. 14 18
36 143.83 precipitation 0.1 270 < th dose independent rect. 9 16
37 143.83 precipitation 0.1 270 < th dose dependent rect. 9 16
42 144.00 wind 9.0 270 < th dose independent rect. 20 17
46 144.44 wind 1.0 270 > th dose independent rect. 13 7
48 144.54 wind 1.0 270 > th dose independent rect. 14 5
60 145.64 precipitation 0.1 270 < th dose independent rect. 8 6
62 145.64 precipitation 0.1 270 < th dose dependent rect. 8 6
75 145.91 temperature 10.0 270 > th dose independent rect. 8 6
76 145.91 atmosphere 995.0 270 > th dose independent rect. 8 6
77 145.91 atmosphere 1015.0 270 < th dose independent rect. 8 6
78 145.91 temperature 10.0 270 > th dose independent rect. 14 18
79 146.07 precipitation 0.1 270 < th dose independent rect. 19 8
80 146.07 wind 9.0 270 < th dose independent rect. 14 18
81 146.07 precipitation 0.1 270 < th dose dependent rect. 19 8
83 146.35 atmosphere 995.0 270 > th dose independent rect. 14 18
85 146.45 wind 9.0 270 < th dose independent rect. 19 8
86 146.57 wind 9.0 270 < th dose independent rect. 8 6
87 146.59 temperature 10.0 270 > th dose independent rect. 19 8
88 146.59 temperature 30.0 270 < th dose independent rect. 19 8
89 146.59 humidity 50.0 270 > th dose independent rect. 19 8
91 146.59 atmosphere 995.0 270 > th dose independent rect. 19 8
92 146.59 radiation 1.0 270 < th dose independent rect. 19 8
97 146.59 temperature 10.0 270 > th dose independent rect. 3 16
98 146.59 atmosphere 1015.0 270 < th dose independent rect. 3 16
99 146.59 radiation 10.0 270 < th dose dependent rect. 19 8
103 146.60 wind 9.0 270 < th dose independent rect. 3 16
106 147.04 precipitation 0.1 270 < th dose independent rect. 14 5
109 147.04 precipitation 0.1 270 < th dose dependent rect. 14 5
115 147.53 precipitation 0.1 270 < th dose independent rect. 7 8
116 147.53 precipitation 0.1 270 < th dose dependent rect. 7 8
118 147.71 temperature 10.0 270 > th dose independent rect. 1 8
120 147.71 humidity 50.0 270 > th dose independent rect. 1 8
121 147.71 atmosphere 995.0 270 > th dose independent rect. 1 8
122 147.71 atmosphere 1015.0 270 < th dose independent rect. 1 8
123 147.71 temperature 10.0 270 > th dose independent rect. 9 16
124 147.72 humidity 50.0 270 > th dose independent rect. 20 17
125 147.75 wind 9.0 270 < th dose independent rect. 1 8
130 147.93 temperature 10.0 270 > th dose independent rect. 7 8
131 147.93 atmosphere 1015.0 270 < th dose independent rect. 7 8
132 147.93 temperature 10.0 270 > th dose independent rect. 15 16
135 148.04 radiation 40.0 10 < th dose dependent rect. 14 7
136 148.05 temperature 30.0 270 < th dose independent rect. 1 8
143 148.15 wind 9.0 270 < th dose independent rect. 15 16
157 148.44 radiation 40.0 270 < th dose independent rect. 1 8
167 148.55 atmosphere 995.0 270 > th dose independent rect. 3 16
169 148.73 radiation 40.0 90 < th dose dependent rect. 15 6
174 148.94 wind 9.0 270 < th dose independent rect. 9 16
181 149.08 humidity 50.0 270 > th dose independent rect. 19 19
194 149.43 radiation 10.0 10 < th dose independent rect. 14 7
198 149.54 atmosphere 995.0 10 > th dose independent rect. 16 5
204 149.66 atmosphere 995.0 270 > th dose dependent rect. 14 5
206 149.70 temperature 10.0 90 > th dose dependent rect. 21 18
226 150.36 wind 1.0 270 > th dose independent rect. 8 6
237 150.63 precipitation 0.1 270 < th dose independent rect. 1 8
238 150.63 precipitation 0.1 270 < th dose dependent rect. 1 8
246 150.74 wind 9.0 10 < th dose independent rect. 16 5
248 150.77 temperature 10.0 10 > th dose independent rect. 16 5
250 150.77 atmosphere 1010.0 10 < th dose independent rect. 16 5
252 150.77 radiation 40.0 10 < th dose independent rect. 16 5
254 150.77 temperature 10.0 10 > th dose independent rect. 21 19
260 150.95 precipitation 0.1 10 < th dose independent rect. 16 5
261 150.95 precipitation 0.1 10 < th dose dependent rect. 16 5
271 151.09 wind 1.0 10 > th dose independent rect. 16 5
289 151.39 precipitation 0.1 10 < th dose independent rect. 21 19
291 151.39 precipitation 0.1 10 < th dose dependent rect. 21 19
316 151.57 wind 1.0 270 > th dose dependent rect. 14 5
318 151.60 wind 9.0 10 < th dose independent rect. 21 19
323 151.67 radiation 40.0 90 < th dose dependent rect. 15 19
336 152.12 radiation 1.0 10 > th dose independent rect. 10 6
356 152.40 humidity 50.0 270 > th dose independent rect. 14 18
360 152.56 humidity 50.0 270 > th dose independent rect. 8 6
363 152.75 humidity 50.0 10 > th dose independent rect. 16 5
381 153.30 atmosphere 995.0 10 > th dose dependent rect. 16 5
387 153.44 wind 1.0 270 > th dose independent rect. 19 8
389 153.52 humidity 90.0 270 < th dose independent rect. 14 5
394 153.59 temperature 10.0 270 > th dose dependent rect. 14 6
401 153.72 temperature 10.0 1440 > th dose independent rect. 17 5
404 153.72 radiation 30.0 1440 < th dose independent rect. 17 5
410 153.72 temperature 10.0 1440 > th dose independent rect. 22 19
424 153.84 atmosphere 995.0 10 > th dose independent rect. 21 19
431 153.95 temperature 10.0 10 > th dose dependent rect. 21 19
440 154.11 radiation 20.0 10 < th dose dependent rect. 7 14
442 154.17 precipitation 0.1 270 < th dose independent rect. 9 4
443 154.17 precipitation 0.1 270 < th dose dependent rect. 9 4
444 154.18 temperature 10.0 270 > th dose independent rect. 9 4
445 154.18 atmosphere 995.0 270 > th dose independent rect. 9 4
446 154.18 atmosphere 1015.0 270 < th dose independent rect. 9 4
447 154.18 temperature 10.0 270 > th dose independent rect. 13 20
456 154.39 wind 9.0 270 < th dose independent rect. 13 20
464 154.49 precipitation 0.1 270 < th dose independent rect. 3 16
465 154.49 precipitation 0.1 270 < th dose dependent rect. 3 16
469 154.57 atmosphere 995.0 10 > th dose independent rect. 16 18
479 154.74 wind 9.0 270 < th dose independent rect. 9 4
483 154.79 humidity 90.0 270 < th dose independent rect. 16 1
484 154.79 temperature 10.0 270 > th dose dependent rect. 8 6
489 154.89 wind 1.0 270 > th dose independent rect. 19 19
498 155.01 atmosphere 1015.0 270 < th dose independent rect. 19 19
500 155.08 wind 1.0 270 > th dose dependent rect. 16 1
546 155.47 atmosphere 995.0 270 > th dose independent rect. 13 20
547 155.47 humidity 50.0 270 > th dose dependent rect. 1 8
557 155.48 precipitation 0.1 270 < th dose independent rect. 14 18
558 155.48 precipitation 0.1 270 < th dose dependent rect. 14 18
574 155.67 radiation 20.0 10 < th dose dependent rect. 10 11
584 155.72 temperature 10.0 10 > th dose independent rect. 10 6
586 155.72 atmosphere 1015.0 10 < th dose independent rect. 10 6
587 155.72 precipitation 0.1 10 < th dose independent rect. 10 6
589 155.72 temperature 10.0 10 > th dose independent rect. 16 18
591 155.72 precipitation 0.1 10 < th dose dependent rect. 10 6
612 155.86 atmosphere 1015.0 270 < th dose independent rect. 14 18
616 155.97 wind 9.0 10 < th dose independent rect. 16 18
629 156.10 wind 1.0 270 > th dose independent rect. 9 4
631 156.13 radiation 10.0 10 < th dose dependent rect. 5 16
677 156.52 temperature 10.0 10 > th dose dependent rect. 16 5
694 156.62 wind 1.0 270 > th dose independent rect. 9 16
699 156.67 temperature 10.0 10 > th dose dependent rect. 10 6
701 156.69 wind 9.0 10 < th dose independent rect. 10 6
721 156.87 radiation 10.0 10 < th dose independent rect. 10 11
729 156.92 humidity 50.0 10 > th dose independent rect. 16 18
750 157.09 humidity 50.0 90 > th dose independent rect. 16 17
802 157.62 radiation 40.0 10 < th dose independent rect. 16 18
803 157.63 humidity 90.0 270 < th dose independent rect. 8 6
896 158.27 humidity 50.0 270 > th dose independent rect. 9 4
915 158.46 radiation 40.0 270 < th dose dependent rect. 1 8
939 158.68 temperature 30.0 10 < th dose independent rect. 16 5
995 159.12 atmosphere 995.0 10 > th dose independent rect. 10 6
999 159.21 humidity 90.0 270 < th dose independent rect. 9 4