Os01g0234100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os01g0234100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.9 | 0.49 | 8.68 | 0.436 | 1.89 | -0.758 | -0.519 | 1.6 | 0.452 | 14.5 | 0.009929 | 4145 | -- | -- |
| 111.34 | 0.491 | 8.67 | 0.52 | 1.87 | -0.986 | -0.431 | -- | 0.404 | 14.4 | 0.06 | 14100 | -- | -- |
| 109.84 | 0.488 | 8.68 | 0.432 | 1.9 | -0.773 | -- | 1.53 | 0.452 | 14.5 | 0.0004894 | 4141 | -- | -- |
| 111 | 0.491 | 8.65 | 0.558 | 1.81 | -0.853 | -- | -- | 0.471 | 14.7 | 0.02001 | 11518 | -- | -- |
| 196.56 | 0.653 | 8.76 | 0.0457 | -- | -2.34 | -- | 2.32 | 0.132 | -- | 2.199 | 4786 | -- | -- |
| 127.22 | 0.529 | 8.62 | 0.983 | 1.84 | -- | -0.391 | -- | 0.636 | 14.8 | -- | -- | -- | -- |
| 127.75 | 0.529 | 8.62 | 0.974 | 1.84 | -- | -- | -- | 0.634 | 14.8 | -- | -- | -- | -- |
| 186.51 | 0.636 | 8.7 | 0.345 | -- | -2.63 | -- | -- | 0.25 | -- | 1.38 | 4786 | -- | -- |
| 115.8 | 0.501 | 8.66 | -- | 1.83 | -1.07 | -- | -- | 0.352 | 14.5 | 0.009315 | 27061 | -- | -- |
| 323.52 | 0.84 | 8.63 | 0.896 | -- | -- | -- | -- | 0.587 | -- | -- | -- | -- | -- |
| 152.75 | 0.578 | 8.64 | -- | 1.82 | -- | -- | -- | 0.525 | 14.8 | -- | -- | -- | -- |
| 188.75 | 0.64 | 8.72 | -- | -- | -2.73 | -- | -- | 0.188 | -- | 1.22 | 4783 | -- | -- |
| 344.68 | 0.867 | 8.65 | -- | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.00 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 3 | 104.39 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 4 | 104.42 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 6 | 104.48 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 8 | 104.51 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 14 | 104.68 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 15 | 104.69 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 17 | 104.77 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 19 | 104.79 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 23 | 104.79 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 24 | 104.81 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 26 | 104.84 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 29 | 104.88 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 32 | 104.90 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 40 | 104.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 43 | 104.96 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 49 | 105.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 54 | 105.05 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 72 | 105.18 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 76 | 105.22 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 80 | 105.24 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 81 | 105.24 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 17 |
| 83 | 105.25 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 89 | 105.27 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 95 | 105.29 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 12 |
| 108 | 105.38 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 119 | 105.41 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 122 | 105.44 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 137 | 105.48 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 155 | 105.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 156 | 105.50 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 158 | 105.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 164 | 105.54 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 200 | 105.56 | wind | 9.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 237 | 105.63 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 278 | 105.66 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 369 | 105.74 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 372 | 105.75 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 373 | 105.76 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 423 | 105.80 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 1 | 11 |
| 431 | 105.81 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 464 | 105.83 | wind | 9.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 483 | 105.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 487 | 105.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 512 | 105.86 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 565 | 105.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 568 | 105.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 569 | 105.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 573 | 105.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 576 | 105.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 604 | 105.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 607 | 105.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 4 |
| 619 | 105.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 628 | 105.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 629 | 105.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 633 | 105.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 635 | 105.99 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 637 | 105.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 639 | 105.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 672 | 106.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 676 | 106.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 681 | 106.03 | radiation | 20.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 684 | 106.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 716 | 106.06 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 731 | 106.09 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 758 | 106.11 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 767 | 106.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 802 | 106.14 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 823 | 106.16 | radiation | 10.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 961 | 106.25 | radiation | 30.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 968 | 106.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 6 |