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Os01g0231500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Casein kinase I (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.36 (0.0211) R2 : 0.787
β1 : -1.58 (0.077) R2dD : 0.203 R2D : 0.173
β2 : 1.78 (0.0507) R2dC : 0.576 R2C : 0.568
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.399 (0.0449) R2dN8 : 0.0495 R2N8 : 0.00204
σ : 0.395
deviance : 71.32
__
_____
C
peak time of C : 10.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.76 0.372 9.39 -1.59 1.21 -0.746 0.182 0.139 -0.447 8.73 12.85 84 -- --
62.8 0.369 9.39 -1.59 1.21 -0.735 0.0618 -- -0.447 8.77 12.84 78 -- --
62.83 0.369 9.38 -1.59 1.23 -0.724 -- 0.0741 -0.446 8.79 13.47 84 -- --
62.81 0.369 9.39 -1.59 1.21 -0.734 -- -- -0.447 8.77 12.88 78 -- --
96.06 0.456 9.42 -1.55 -- -1.29 -- 0.128 -0.437 -- 6.599 6 -- --
71.32 0.396 9.36 -1.58 1.78 -- 0.02 -- -0.399 10.2 -- -- -- --
71.32 0.395 9.36 -1.58 1.78 -- -- -- -0.399 10.2 -- -- -- --
95.56 0.457 9.42 -1.58 -- -1.28 -- -- -0.446 -- 5.652 44 -- --
127.91 0.527 9.34 -- 1.21 -0.761 -- -- -0.281 8.65 10 81 -- --
263.11 0.758 9.41 -1.6 -- -- -- -- -0.403 -- -- -- -- --
136.72 0.547 9.32 -- 1.78 -- -- -- -0.224 10.3 -- -- -- --
160.82 0.593 9.38 -- -- -1.31 -- -- -0.251 -- 7.656 16 -- --
330.76 0.849 9.37 -- -- -- -- -- -0.226 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 60.25 radiation 1 30 > th dose independent sin 22 NA
2 60.38 radiation 1 30 < th dose independent sin 22 NA
13 61.32 radiation 1 30 < th dose independent rect. 5 16
14 61.33 radiation 10 90 < th dose dependent sin 22 NA
16 61.51 temperature 30 90 < th dose dependent rect. 15 6
18 61.53 temperature 30 10 < th dose dependent rect. 14 7
21 61.65 temperature 30 90 < th dose dependent rect. 13 8
23 61.72 radiation 10 90 > th dose independent rect. 9 23
28 61.79 temperature 30 270 < th dose independent rect. 17 1
30 61.81 wind 1 4320 > th dose independent rect. 4 2
32 61.82 temperature 30 10 < th dose dependent rect. 12 9
35 61.89 radiation 1 90 < th dose independent rect. 5 14
40 61.93 temperature 30 270 < th dose independent rect. 15 4
42 61.94 radiation 1 90 < th dose dependent rect. 5 14
44 61.99 temperature 30 270 < th dose independent rect. 13 7
52 62.13 radiation 10 270 < th dose dependent rect. 16 2
57 62.21 wind 1 4320 < th dose independent rect. 4 2
102 62.65 radiation 10 90 < th dose dependent rect. 9 12
113 62.73 temperature 25 30 > th dose dependent rect. 12 18
117 62.76 temperature 25 30 > th dose dependent rect. 12 20
119 62.78 temperature 25 30 > th dose dependent rect. 12 16
136 62.90 temperature 30 270 < th dose dependent rect. 17 1
138 62.91 radiation 1 10 < th dose independent rect. 11 10
149 62.97 temperature 25 30 > th dose dependent rect. 12 12
153 62.97 radiation 10 90 < th dose dependent rect. 15 22
157 63.00 radiation 1 10 < th dose independent rect. 13 8
183 63.11 radiation 10 90 < th dose dependent rect. 13 23
189 63.14 atmosphere 1000 90 > th dose independent rect. 17 16
191 63.16 humidity 90 4320 > th dose independent rect. 4 1
195 63.18 radiation 1 10 < th dose independent rect. 15 6
197 63.18 radiation 10 90 < th dose dependent rect. 9 23
205 63.22 radiation 10 90 < th dose dependent no NA NA
207 63.22 temperature 25 30 > th dose dependent rect. 12 23
223 63.26 radiation 10 90 < th dose dependent rect. 11 23
225 63.27 temperature 25 30 > th dose dependent rect. 12 7
266 63.35 humidity 70 90 > th dose independent rect. 13 8
279 63.41 humidity 50 90 > th dose dependent rect. 15 6
285 63.43 humidity 70 90 > th dose independent rect. 15 6
298 63.48 radiation 1 10 < th dose dependent rect. 11 10
302 63.48 radiation 10 90 < th dose dependent rect. 15 18
305 63.49 humidity 60 10 > th dose dependent rect. 8 13
323 63.56 radiation 10 270 < th dose independent rect. 16 2
327 63.57 radiation 1 10 < th dose dependent rect. 13 8
334 63.59 radiation 10 43200 < th dose dependent rect. 22 5
339 63.60 humidity 50 270 > th dose dependent rect. 17 1
380 63.68 humidity 50 10 > th dose dependent rect. 17 19
398 63.73 temperature 30 270 < th dose independent rect. 13 20
406 63.74 radiation 1 10 < th dose dependent rect. 15 6
441 63.80 humidity 60 90 > th dose dependent rect. 13 8
471 63.86 humidity 70 270 > th dose independent rect. 17 1
478 63.86 humidity 50 10 > th dose dependent rect. 17 17
480 63.87 temperature 30 10 < th dose dependent rect. 4 17
485 63.89 humidity 70 10 > th dose dependent rect. 10 11
493 63.91 wind 1 4320 < th dose dependent rect. 4 2
497 63.92 humidity 60 10 > th dose dependent rect. 17 4
499 63.93 humidity 70 10 > th dose independent rect. 17 4
520 63.97 temperature 30 270 < th dose independent rect. 2 17
527 63.98 radiation 1 10 > th dose independent rect. 10 9
538 63.98 radiation 1 90 > th dose independent rect. 7 23
545 63.99 temperature 25 10 > th dose dependent sin 18 NA
584 64.04 temperature 25 10 > th dose dependent rect. 10 22
611 64.09 atmosphere 1000 270 > th dose independent rect. 15 18
618 64.10 humidity 70 10 > th dose dependent sin 22 NA
656 64.15 radiation 10 90 > th dose independent rect. 9 9
674 64.16 radiation 20 270 < th dose independent rect. 13 6
696 64.19 temperature 30 90 < th dose independent rect. 16 17
755 64.28 humidity 70 30 > th dose independent rect. 2 19
784 64.33 temperature 30 1440 > th dose independent rect. 8 6
830 64.36 humidity 90 4320 < th dose independent rect. 4 1
840 64.36 humidity 70 10 > th dose independent rect. 8 13
865 64.37 temperature 25 10 > th dose dependent rect. 10 20
874 64.40 radiation 10 90 > th dose independent no NA NA
877 64.40 radiation 10 90 > th dose independent rect. 6 12
963 64.41 radiation 10 90 < th dose dependent rect. 23 23
966 64.42 radiation 1 43200 < th dose dependent rect. 24 3
973 64.43 temperature 30 10 < th dose dependent rect. 2 19
981 64.44 temperature 25 30 > th dose dependent rect. 10 18
984 64.44 humidity 50 30 > th dose dependent rect. 13 23
999 64.47 temperature 25 4320 > th dose dependent rect. 1 5