Os01g0230800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0230800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.88 | 0.525 | 8.7 | 1.64 | 0.607 | -1.59 | 0.212 | 0.559 | -0.0372 | 8.29 | 22.2 | 1491 | -- | -- |
| 125.62 | 0.522 | 8.7 | 1.45 | 0.603 | -1.6 | 0.239 | -- | -0.0579 | 8.16 | 22.1 | 1457 | -- | -- |
| 124.95 | 0.521 | 8.7 | 1.64 | 0.605 | -1.59 | -- | 0.567 | -0.036 | 8.27 | 22.16 | 1460 | -- | -- |
| 125.69 | 0.522 | 8.72 | 1.46 | 0.608 | -1.59 | -- | -- | -0.0834 | 8.25 | 22.12 | 1460 | -- | -- |
| 139.04 | 0.549 | 8.72 | 1.59 | -- | -1.49 | -- | 0.634 | -0.0439 | -- | 22.28 | 988 | -- | -- |
| 217.64 | 0.692 | 8.83 | 0.869 | 0.597 | -- | 0.113 | -- | -0.606 | 8.65 | -- | -- | -- | -- |
| 217.68 | 0.691 | 8.83 | 0.873 | 0.596 | -- | -- | -- | -0.606 | 8.68 | -- | -- | -- | -- |
| 139.85 | 0.551 | 8.74 | 1.41 | -- | -1.52 | -- | -- | -0.0953 | -- | 22.12 | 993 | -- | -- |
| 174.8 | 0.616 | 8.75 | -- | 0.605 | -1.23 | -- | -- | -0.293 | 7.64 | 22.3 | 1245 | -- | -- |
| 237.75 | 0.72 | 8.85 | 0.875 | -- | -- | -- | -- | -0.601 | -- | -- | -- | -- | -- |
| 237.77 | 0.721 | 8.86 | -- | 0.599 | -- | -- | -- | -0.703 | 8.57 | -- | -- | -- | -- |
| 185.15 | 0.634 | 8.79 | -- | -- | -1.19 | -- | -- | -0.331 | -- | 22.39 | 788 | -- | -- |
| 257.93 | 0.75 | 8.87 | -- | -- | -- | -- | -- | -0.698 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 6 | 125.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 9 | 125.79 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 104 | 127.16 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 285 | 129.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 400 | 130.79 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 498 | 131.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 571 | 132.53 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 603 | 132.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 640 | 133.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 697 | 133.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 742 | 134.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 835 | 135.04 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 881 | 135.39 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |