Os01g0229300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Embryonic flower 1-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0229300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Embryonic flower 1-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.57 | 0.344 | 7.92 | 0.788 | 1.03 | -0.743 | -1.03 | -0.0786 | -0.102 | 2.21 | 20.6 | 9 | -- | -- |
| 53.49 | 0.341 | 7.92 | 0.793 | 1.04 | -0.746 | -1.1 | -- | -0.0988 | 2.17 | 20.09 | 7 | -- | -- |
| 56.16 | 0.349 | 7.91 | 0.803 | 1.17 | -0.85 | -- | -0.422 | -0.0781 | 1.99 | 20.6 | 9 | -- | -- |
| 58.07 | 0.355 | 7.92 | 0.82 | 1.04 | -0.758 | -- | -- | -0.0927 | 2.2 | 21.04 | 7 | -- | -- |
| 81.79 | 0.424 | 7.91 | 0.828 | -- | -0.0777 | -- | -1.05 | -0.075 | -- | 42.32 | 5 | -- | -- |
| 66.53 | 0.382 | 7.91 | 0.835 | 0.573 | -- | -0.958 | -- | -0.094 | 4.67 | -- | -- | -- | -- |
| 68.4 | 0.387 | 7.9 | 0.842 | 0.581 | -- | -- | -- | -0.0887 | 5.3 | -- | -- | -- | -- |
| 85.36 | 0.43 | 7.91 | 0.861 | -- | -0.0916 | -- | -- | -0.0735 | -- | 22.57 | 6 | -- | -- |
| 75.7 | 0.405 | 7.94 | -- | 1.08 | -0.786 | -- | -- | -0.17 | 2.19 | 22.03 | 8 | -- | -- |
| 86.02 | 0.433 | 7.91 | 0.862 | -- | -- | -- | -- | -0.0742 | -- | -- | -- | -- | -- |
| 87.06 | 0.436 | 7.93 | -- | 0.596 | -- | -- | -- | -0.182 | 5.24 | -- | -- | -- | -- |
| 104.89 | 0.477 | 7.93 | -- | -- | -0.1 | -- | -- | -0.169 | -- | 27.04 | 6 | -- | -- |
| 105.61 | 0.48 | 7.93 | -- | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 9 | 49.82 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 35 | 50.12 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 37 | 50.15 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 38 | 50.15 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 40 | 50.18 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 46 | 50.21 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 109 | 50.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 111 | 50.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 122 | 50.74 | wind | 5 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 127 | 50.78 | wind | 3 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 148 | 50.86 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 150 | 50.87 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 154 | 50.89 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |
| 179 | 51.00 | wind | 7 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 182 | 51.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 183 | 51.01 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 187 | 51.02 | wind | 1 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 196 | 51.06 | humidity | 90 | 14400 | < th | dose independent | sin | 8 | NA |
| 208 | 51.09 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 231 | 51.17 | radiation | 20 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 234 | 51.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 238 | 51.19 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 256 | 51.25 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 268 | 51.27 | humidity | 90 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 270 | 51.28 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 277 | 51.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 18 |
| 283 | 51.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 289 | 51.31 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 293 | 51.32 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 294 | 51.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 357 | 51.41 | wind | 1 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 370 | 51.43 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 385 | 51.44 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 394 | 51.44 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 419 | 51.46 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 433 | 51.48 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 442 | 51.49 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 445 | 51.50 | radiation | 1 | 14400 | < th | dose independent | sin | 8 | NA |
| 450 | 51.50 | temperature | 30 | 90 | < th | dose dependent | sin | 16 | NA |
| 451 | 51.50 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 7 |
| 466 | 51.52 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 480 | 51.53 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 486 | 51.54 | radiation | 1 | 14400 | > th | dose independent | sin | 7 | NA |
| 489 | 51.54 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 494 | 51.54 | wind | 7 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 516 | 51.56 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 521 | 51.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 21 |
| 523 | 51.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 565 | 51.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 628 | 51.60 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 666 | 51.62 | temperature | 10 | 90 | > th | dose dependent | sin | 16 | NA |
| 680 | 51.63 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 683 | 51.64 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 686 | 51.64 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 708 | 51.67 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 709 | 51.67 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 712 | 51.67 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 731 | 51.68 | humidity | 90 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 771 | 51.71 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 783 | 51.72 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 795 | 51.74 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 17 |
| 803 | 51.75 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 808 | 51.76 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 816 | 51.76 | wind | 7 | 14400 | > th | dose dependent | rect. | 7 | 5 |
| 822 | 51.77 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 829 | 51.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 863 | 51.80 | radiation | 1 | 14400 | < th | dose dependent | rect. | 20 | 14 |
| 875 | 51.81 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 11 |
| 897 | 51.83 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 912 | 51.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 913 | 51.84 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 924 | 51.84 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 938 | 51.85 | radiation | 1 | 14400 | < th | dose dependent | sin | 7 | NA |
| 940 | 51.85 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 952 | 51.86 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 966 | 51.87 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 8 | 1 |