Os01g0227500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os01g0227500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.62 | 0.573 | 8.72 | -0.943 | 1.85 | 2.03 | 0.239 | -4.9 | -0.479 | 12.9 | 20.31 | 1302 | -- | -- |
| 167.33 | 0.602 | 8.62 | -0.188 | 1.61 | 2.32 | 0.568 | -- | -0.374 | 12.8 | 13.71 | 8890 | -- | -- |
| 148.81 | 0.568 | 8.73 | -0.977 | 1.86 | 2.04 | -- | -5.06 | -0.493 | 12.9 | 20.58 | 1297 | -- | -- |
| 167.52 | 0.603 | 8.6 | -0.0812 | 1.7 | 2.35 | -- | -- | -0.308 | 12.8 | 11.04 | 7418 | -- | -- |
| 231.09 | 0.712 | 8.66 | -0.0699 | -- | 3.1 | -- | -3.32 | -0.334 | -- | 19.19 | 9 | -- | -- |
| 260.04 | 0.756 | 8.46 | 1.09 | 1.64 | -- | 0.457 | -- | 0.318 | 12.7 | -- | -- | -- | -- |
| 260.93 | 0.756 | 8.46 | 1.11 | 1.64 | -- | -- | -- | 0.32 | 12.7 | -- | -- | -- | -- |
| 239.93 | 0.721 | 8.6 | 0.418 | -- | 3.16 | -- | -- | -0.195 | -- | 17.39 | 9 | -- | -- |
| 167.66 | 0.603 | 8.6 | -- | 1.7 | 2.32 | -- | -- | -0.297 | 12.8 | 9.891 | 7434 | -- | -- |
| 429.55 | 0.968 | 8.49 | 1.05 | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
| 293.52 | 0.801 | 8.49 | -- | 1.62 | -- | -- | -- | 0.196 | 12.7 | -- | -- | -- | -- |
| 243.45 | 0.727 | 8.62 | -- | -- | 3.77 | -- | -- | -0.255 | -- | 14.13 | 9 | -- | -- |
| 458.79 | 1 | 8.52 | -- | -- | -- | -- | -- | 0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 3 | 147.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 5 | 148.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 6 | 148.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 11 | 148.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 17 |
| 16 | 148.34 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 35 | 148.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 39 | 148.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 62 | 149.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 128 | 149.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 150 | 149.49 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 171 | 149.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 318 | 151.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 356 | 152.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 376 | 152.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 509 | 154.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 586 | 154.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 816 | 155.13 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 836 | 155.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 934 | 155.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 964 | 155.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |