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Os01g0224700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Flavin monoxygenase-like protein floozy.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.16 (0.0502) R2 : 0.259
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.14 (0.19) R2dE : 0.223 R2E : 0.0898
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.939 (0.109) R2dN8 : 0.169 R2N8 : 0.0355
σ : 0.934
deviance : 402.32
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 8
memory length : 2565
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
379.04 0.915 7.26 -0.449 1 1.69 -0.314 5.77 0.681 8.78 2.06 4318 -- --
393.48 0.924 7.13 0.906 0.755 1.45 -0.727 -- 0.995 9.59 5.882 13765 -- --
376.62 0.904 7.22 -0.311 1.11 1.57 -- 5.25 0.733 9.55 3.212 4424 -- --
387.72 0.917 7.08 0.801 0.733 1.65 -- -- 1.16 9.66 5.832 15176 -- --
399.03 0.93 7.14 -0.274 -- 1.95 -- 5.27 0.798 -- 10 2585 -- --
446.81 0.991 7.2 0.553 1.01 -- -0.294 -- 0.651 9.08 -- -- -- --
447.11 0.99 7.2 0.542 1.01 -- -- -- 0.651 9.05 -- -- -- --
394.52 0.925 7.14 0.555 -- 2.09 -- -- 1.01 -- 6.603 2583 -- --
399.07 0.93 7.12 -- 0.771 1.53 -- -- 1.02 9.86 7.985 15176 -- --
506.29 1.05 7.22 0.541 -- -- -- -- 0.657 -- -- -- -- --
454.86 0.998 7.21 -- 1.01 -- -- -- 0.59 9.01 -- -- -- --
402.32 0.934 7.16 -- -- 2.14 -- -- 0.939 -- 8 2565 -- --
514 1.06 7.24 -- -- -- -- -- 0.597 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 365.70 radiation 10.0 1440 < th dose dependent rect. 17 13
2 366.13 radiation 10.0 1440 < th dose dependent rect. 17 8
3 366.16 radiation 10.0 1440 < th dose dependent rect. 17 10
4 366.27 radiation 40.0 1440 < th dose dependent rect. 17 8
6 366.36 radiation 10.0 1440 < th dose dependent rect. 17 6
10 366.48 radiation 40.0 1440 < th dose dependent rect. 17 10
15 366.68 radiation 1.0 1440 > th dose dependent rect. 17 13
27 367.23 radiation 40.0 1440 < th dose dependent rect. 17 6
32 367.32 radiation 1.0 1440 > th dose dependent rect. 17 1
49 367.85 radiation 1.0 1440 > th dose dependent rect. 16 15
52 367.95 radiation 30.0 1440 < th dose dependent rect. 16 15
67 368.87 radiation 10.0 14400 > th dose dependent rect. 16 2
81 368.94 temperature 25.0 14400 > th dose dependent rect. 5 1
84 369.24 temperature 30.0 14400 > th dose dependent rect. 17 1
91 369.76 radiation 30.0 14400 < th dose independent rect. 15 10
92 369.77 radiation 30.0 14400 < th dose independent rect. 15 12
95 369.79 radiation 30.0 14400 < th dose independent rect. 15 8
97 369.79 radiation 30.0 14400 > th dose independent rect. 15 17
99 369.82 radiation 30.0 14400 < th dose independent rect. 15 2
120 369.98 radiation 20.0 14400 < th dose dependent rect. 16 1
122 370.03 radiation 40.0 14400 < th dose dependent rect. 16 1
126 370.13 radiation 20.0 14400 < th dose dependent rect. 16 9
127 370.14 radiation 40.0 14400 < th dose dependent rect. 16 9
128 370.14 radiation 20.0 14400 < th dose dependent rect. 16 11
130 370.15 radiation 20.0 14400 < th dose dependent rect. 16 7
132 370.16 radiation 30.0 14400 > th dose independent rect. 15 2
148 370.16 radiation 40.0 14400 < th dose dependent rect. 16 11
154 370.19 radiation 40.0 14400 < th dose dependent rect. 16 7
156 370.20 radiation 10.0 14400 > th dose independent rect. 16 14
180 370.49 wind 5.0 43200 > th dose dependent rect. 5 6
181 370.50 radiation 10.0 14400 > th dose independent rect. 16 2
195 370.71 precipitation 0.1 43200 > th dose dependent rect. 4 14
198 370.76 humidity 90.0 43200 > th dose dependent rect. 9 2
204 370.85 radiation 10.0 14400 < th dose independent rect. 16 1
206 370.91 wind 7.0 43200 < th dose independent rect. 6 5
221 371.03 wind 5.0 43200 > th dose dependent rect. 20 17
222 371.05 temperature 30.0 14400 > th dose independent rect. 17 1
227 371.11 radiation 20.0 1440 > th dose dependent rect. 15 17
229 371.13 wind 7.0 43200 > th dose independent rect. 6 5
241 371.17 radiation 10.0 1440 < th dose independent rect. 16 9
242 371.17 wind 7.0 43200 > th dose independent rect. 20 17
243 371.17 wind 7.0 43200 < th dose independent rect. 20 17
244 371.18 radiation 10.0 1440 < th dose independent rect. 16 11
249 371.23 radiation 10.0 1440 < th dose independent rect. 16 15
251 371.25 radiation 10.0 1440 < th dose independent rect. 16 7
253 371.26 radiation 10.0 1440 > th dose independent rect. 16 15
266 371.28 radiation 40.0 4320 > th dose dependent rect. 13 2
302 371.43 radiation 10.0 14400 < th dose independent rect. 16 9
306 371.44 radiation 10.0 14400 < th dose independent rect. 16 11
309 371.46 radiation 10.0 1440 < th dose independent rect. 16 2
310 371.46 radiation 10.0 14400 < th dose independent rect. 16 7
319 371.53 radiation 30.0 14400 > th dose dependent rect. 15 2
355 371.60 wind 5.0 43200 > th dose dependent sin 6 NA
363 371.71 radiation 10.0 1440 > th dose independent rect. 16 2
421 372.03 temperature 25.0 14400 > th dose independent rect. 4 1
459 372.21 wind 5.0 43200 > th dose dependent rect. 6 2
513 372.54 wind 5.0 43200 > th dose dependent rect. 9 2
531 372.59 temperature 30.0 14400 < th dose independent rect. 17 8
539 372.64 temperature 30.0 14400 < th dose independent rect. 17 6
545 372.67 temperature 30.0 14400 < th dose independent rect. 17 15
560 372.76 radiation 40.0 1440 > th dose dependent sin 13 NA
587 372.85 precipitation 0.1 43200 > th dose dependent rect. 6 3
589 372.86 precipitation 0.1 43200 > th dose independent rect. 6 3
606 373.08 temperature 25.0 14400 > th dose dependent rect. 22 1
608 373.09 precipitation 0.1 43200 > th dose dependent rect. 4 18
612 373.12 wind 7.0 43200 < th dose independent sin 7 NA
622 373.23 radiation 30.0 14400 > th dose independent rect. 7 1
624 373.23 wind 5.0 43200 > th dose independent rect. 5 3
641 373.29 precipitation 0.1 43200 > th dose dependent rect. 1 17
645 373.33 precipitation 0.1 43200 > th dose dependent rect. 17 17
649 373.36 precipitation 0.1 43200 > th dose dependent rect. 17 19
651 373.38 wind 7.0 43200 > th dose independent sin 7 NA
653 373.39 precipitation 0.1 43200 > th dose dependent rect. 5 21
664 373.47 precipitation 0.1 43200 > th dose dependent sin 23 NA
665 373.48 wind 5.0 43200 < th dose independent rect. 5 3
717 373.60 temperature 25.0 14400 > th dose dependent rect. 21 9
733 373.65 precipitation 0.1 43200 > th dose dependent rect. 20 22
746 373.74 precipitation 0.1 43200 > th dose dependent rect. 17 14
784 373.88 radiation 20.0 1440 > th dose independent rect. 15 17
789 373.90 wind 7.0 43200 < th dose independent rect. 23 14
791 373.91 precipitation 0.1 43200 > th dose dependent rect. 17 9
793 373.92 humidity 90.0 43200 > th dose independent rect. 9 4
804 374.00 wind 7.0 43200 < th dose independent rect. 2 11
825 374.03 wind 7.0 43200 > th dose dependent rect. 20 12
877 374.21 wind 7.0 43200 > th dose independent rect. 23 14
890 374.24 precipitation 0.1 43200 > th dose dependent rect. 1 20
927 374.33 wind 7.0 43200 > th dose independent rect. 2 11
963 374.44 precipitation 0.1 43200 < th dose independent rect. 8 10
964 374.44 precipitation 0.1 43200 < th dose dependent rect. 8 10
968 374.46 precipitation 0.1 43200 > th dose independent rect. 5 13
974 374.48 precipitation 0.1 43200 < th dose independent rect. 5 13
976 374.48 precipitation 0.1 43200 < th dose dependent rect. 5 13
996 374.52 precipitation 0.1 43200 < th dose independent rect. 7 2
999 374.52 precipitation 0.1 43200 < th dose dependent rect. 7 2