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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0223900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.4 (0.0513) R2 : 0.394
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.7 (0.216) R2dE : 0.411 R2E : 0.36
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.477 (0.111) R2dN8 : 0.0339 R2N8 : -0.0177
σ : 0.958
deviance : 423.43
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 6.296
memory length : 4315
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.9
open length of G : 10.1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
410.63 0.952 3.5 -0.199 1.4 -3.99 -0.816 -3.41 0.434 1.15 6.983 4320 19 10
412.49 0.946 3.49 -0.676 1.43 -2.57 -0.99 -- 0.307 1.05 7.082 4320 18.9 9.96
411.95 0.945 3.49 -0.108 1.4 -3.97 -- -3.49 0.463 1.15 5.894 4320 19 10
415.54 0.949 3.4 -0.539 1.27 -2.5 -- -- 0.413 1.02 5.781 4320 19 9.96
447.63 0.985 3.49 -0.154 -- -3.73 -- -3.23 0.407 -- 6.082 4318 19 10
489.61 1.04 3.51 -2.38 1.01 -- -1.29 -- -0.192 1.62 -- -- -- --
496.24 1.04 3.51 -2.33 1.02 -- -- -- -0.185 1.72 -- -- -- --
424.98 0.96 3.4 -0.518 -- -3.25 -- -- 0.532 -- 5.825 4315 18.9 10.1
415.17 0.949 3.4 -- 1.01 -2.58 -- -- 0.534 0.863 5.937 4319 19 9.97
558.96 1.1 3.5 -2.29 -- -- -- -- -0.162 -- -- -- -- --
639.85 1.18 3.45 -- 0.973 -- -- -- 0.0749 1.65 -- -- -- --
423.43 0.958 3.4 -- -- -3.7 -- -- 0.477 -- 6.296 4315 18.9 10.1
697.64 1.23 3.44 -- -- -- -- -- 0.0921 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 398.04 radiation 10 43200 < th dose dependent rect. 19 10
2 398.20 radiation 10 43200 < th dose dependent rect. 24 5
3 398.27 radiation 10 43200 < th dose dependent rect. 21 8
4 398.28 radiation 10 43200 < th dose dependent rect. 4 1
23 399.47 radiation 1 43200 < th dose independent rect. 19 10
26 399.72 radiation 1 43200 < th dose independent rect. 24 5
27 399.77 radiation 1 43200 < th dose independent rect. 4 1
29 399.88 radiation 1 43200 < th dose independent rect. 21 8
31 399.96 radiation 1 43200 > th dose independent rect. 4 1
42 399.96 radiation 1 43200 > th dose dependent rect. 4 1
92 403.25 radiation 40 43200 < th dose independent rect. 6 2
94 403.53 radiation 40 43200 < th dose independent rect. 17 15
99 403.84 radiation 40 43200 < th dose independent rect. 24 8
100 403.95 radiation 40 43200 < th dose independent rect. 21 11
111 405.37 radiation 10 43200 < th dose independent rect. 18 8
113 405.47 radiation 1 43200 > th dose independent rect. 9 1
115 405.54 radiation 10 43200 < th dose independent rect. 18 5
117 405.55 radiation 10 43200 < th dose independent rect. 18 2
124 405.68 radiation 1 43200 < th dose independent rect. 9 2
126 406.13 radiation 30 43200 > th dose dependent rect. 7 1
152 407.60 radiation 1 43200 < th dose dependent rect. 8 5
158 407.80 radiation 1 43200 < th dose dependent rect. 9 1
167 408.05 radiation 1 43200 > th dose dependent rect. 18 1
178 408.34 radiation 40 43200 < th dose independent rect. 15 11
180 408.43 radiation 40 43200 < th dose independent rect. 15 8
184 408.46 radiation 40 43200 < th dose independent rect. 15 5
187 408.48 radiation 1 43200 < th dose dependent rect. 9 3
219 408.78 radiation 10 43200 < th dose dependent rect. 18 12
248 410.63 wind 9 43200 > th dose dependent rect. 14 2
252 410.95 wind 9 43200 > th dose independent rect. 14 2
259 411.47 temperature 20 43200 < th dose independent rect. 14 1
263 411.63 temperature 20 43200 > th dose independent rect. 14 1
264 411.71 wind 1 43200 < th dose dependent rect. 18 12
265 411.79 wind 9 43200 > th dose independent rect. 11 8
283 412.03 wind 9 43200 < th dose independent rect. 11 7
285 412.13 wind 9 43200 > th dose independent rect. 11 1
286 412.15 wind 9 43200 < th dose independent rect. 14 3
291 412.23 wind 9 43200 < th dose independent rect. 11 1
300 412.66 wind 9 43200 > th dose independent rect. 11 4
301 412.66 wind 1 43200 < th dose independent rect. 18 11
306 412.82 wind 9 43200 > th dose independent rect. 11 11
314 413.01 wind 1 43200 < th dose dependent rect. 20 1
331 413.59 temperature 15 43200 > th dose independent rect. 2 1
332 413.60 wind 9 43200 > th dose independent rect. 13 5
338 413.99 wind 7 43200 > th dose dependent rect. 11 3
352 414.32 temperature 15 43200 < th dose independent rect. 2 1
359 414.49 wind 1 43200 < th dose independent rect. 20 1
362 414.60 temperature 15 43200 > th dose independent rect. 2 3
375 414.81 wind 9 43200 < th dose independent rect. 11 11
383 414.90 wind 9 43200 > th dose dependent rect. 11 1
395 415.06 wind 7 43200 > th dose dependent rect. 11 6
415 415.37 wind 9 43200 > th dose dependent rect. 11 9
430 415.49 wind 1 43200 < th dose independent rect. 20 9
434 415.63 temperature 20 43200 < th dose dependent rect. 10 1
437 415.68 temperature 20 43200 < th dose dependent rect. 22 1
439 415.78 wind 1 43200 > th dose independent rect. 20 1
495 416.59 temperature 20 43200 < th dose dependent rect. 10 14
503 416.68 wind 1 43200 > th dose independent rect. 16 2
507 416.74 temperature 20 43200 < th dose dependent rect. 7 17
509 416.76 wind 1 43200 > th dose independent rect. 15 4
527 416.96 temperature 20 43200 < th dose dependent rect. 13 11
553 417.27 wind 1 43200 < th dose independent rect. 15 4
568 417.39 temperature 20 43200 < th dose independent rect. 7 1
572 417.43 temperature 20 43200 < th dose dependent sin 20 NA
582 417.53 temperature 20 43200 < th dose dependent rect. 7 7
585 417.54 temperature 20 43200 < th dose dependent rect. 7 5
600 417.69 humidity 90 43200 < th dose independent rect. 23 5
619 417.90 temperature 20 43200 < th dose dependent rect. 7 1
652 418.27 wind 1 43200 < th dose dependent rect. 22 7
653 418.31 temperature 20 43200 > th dose independent rect. 7 1
666 418.40 wind 1 43200 < th dose independent rect. 16 2
669 418.41 temperature 15 43200 < th dose independent rect. 4 1
726 418.84 humidity 90 43200 < th dose independent rect. 24 1
751 419.02 humidity 90 43200 < th dose independent rect. 2 1
756 419.05 humidity 90 43200 < th dose independent rect. 21 8
761 419.10 temperature 15 43200 > th dose independent rect. 9 1
770 419.16 temperature 20 43200 < th dose independent rect. 7 9
838 419.72 temperature 15 43200 > th dose independent rect. 23 11
841 419.75 temperature 15 43200 > th dose independent rect. 23 13
874 419.95 humidity 80 43200 > th dose dependent rect. 13 16
892 420.08 humidity 80 43200 > th dose dependent rect. 22 2
901 420.13 wind 1 43200 > th dose independent rect. 3 1
933 420.28 wind 1 43200 > th dose independent rect. 18 11
945 420.35 humidity 80 43200 > th dose dependent rect. 18 10
975 420.51 temperature 30 14400 < th dose independent sin 14 NA
998 420.62 temperature 30 14400 < th dose independent rect. 15 15
1000 420.63 temperature 30 14400 > th dose independent sin 14 NA