Os01g0223600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pto kinase interactor 1-like protein.
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Os01g0223600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pto kinase interactor 1-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.79 | 0.409 | 10.9 | 0.608 | 1.38 | 0.986 | -0.737 | -0.735 | -0.055 | 12.4 | 19.87 | 643 | -- | -- |
| 76.01 | 0.406 | 10.9 | 0.575 | 1.38 | 1.26 | -0.8 | -- | -0.0623 | 12.4 | 19.53 | 636 | -- | -- |
| 76.66 | 0.408 | 10.9 | 0.727 | 1.38 | 0.662 | -- | -1.52 | 0.0051 | 12.5 | 22.71 | 723 | -- | -- |
| 78.83 | 0.414 | 10.9 | 0.553 | 1.37 | 1.29 | -- | -- | -0.0663 | 12.4 | 19.44 | 673 | -- | -- |
| 184.02 | 0.632 | 10.9 | 1.01 | -- | 1.35 | -- | -1.6 | 0.213 | -- | 26.3 | 878 | -- | -- |
| 86.29 | 0.435 | 11 | 0.348 | 1.44 | -- | -0.89 | -- | -0.154 | 12.3 | -- | -- | -- | -- |
| 89.69 | 0.443 | 11 | 0.314 | 1.44 | -- | -- | -- | -0.158 | 12.4 | -- | -- | -- | -- |
| 186.88 | 0.637 | 10.9 | 0.69 | -- | 1.44 | -- | -- | 0.127 | -- | 25.86 | 878 | -- | -- |
| 85.71 | 0.431 | 10.9 | -- | 1.39 | 1.09 | -- | -- | -0.148 | 12.4 | 18.7 | 569 | -- | -- |
| 220.58 | 0.694 | 11 | 0.266 | -- | -- | -- | -- | -0.181 | -- | -- | -- | -- | -- |
| 92.3 | 0.449 | 11 | -- | 1.44 | -- | -- | -- | -0.193 | 12.4 | -- | -- | -- | -- |
| 197.79 | 0.655 | 10.9 | -- | -- | 1.16 | -- | -- | 0.00851 | -- | 25.9 | 873 | -- | -- |
| 222.44 | 0.696 | 11 | -- | -- | -- | -- | -- | -0.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 6 | 69.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 8 | 69.23 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 7 |
| 19 | 70.16 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 22 | 70.37 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 26 | 70.53 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 29 | 70.60 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 9 |
| 34 | 70.73 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 35 | 70.74 | wind | 9 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 38 | 70.80 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 44 | 70.85 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 49 | 70.91 | wind | 9 | 43200 | > th | dose independent | sin | 21 | NA |
| 58 | 70.95 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 66 | 71.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 8 |
| 68 | 71.01 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 80 | 71.05 | wind | 9 | 43200 | < th | dose independent | sin | 22 | NA |
| 87 | 71.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 99 | 71.11 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 14 |
| 101 | 71.12 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 102 | 71.12 | wind | 9 | 43200 | < th | dose independent | rect. | 12 | 20 |
| 108 | 71.14 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 134 | 71.20 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 14 |
| 139 | 71.21 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 1 | 15 |
| 145 | 71.22 | radiation | 40 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 161 | 71.28 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 195 | 71.35 | radiation | 30 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 275 | 71.53 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 409 | 71.72 | temperature | 15 | 270 | > th | dose independent | rect. | 23 | 15 |
| 426 | 71.73 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 427 | 71.74 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 473 | 71.79 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 477 | 71.80 | wind | 9 | 43200 | > th | dose independent | no | NA | NA |
| 486 | 71.81 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 550 | 71.91 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 584 | 71.98 | wind | 9 | 43200 | < th | dose independent | no | NA | NA |
| 585 | 71.98 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 615 | 72.04 | wind | 9 | 43200 | > th | dose dependent | sin | 17 | NA |
| 637 | 72.09 | wind | 7 | 43200 | > th | dose dependent | sin | 22 | NA |
| 658 | 72.13 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 660 | 72.13 | wind | 7 | 43200 | > th | dose dependent | rect. | 4 | 14 |
| 667 | 72.17 | wind | 7 | 90 | < th | dose independent | rect. | 1 | 15 |
| 757 | 72.31 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 10 | 19 |
| 803 | 72.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 808 | 72.39 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 9 | 19 |
| 876 | 72.45 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 899 | 72.46 | radiation | 40 | 43200 | < th | dose independent | rect. | 18 | 18 |
| 971 | 72.55 | temperature | 15 | 270 | > th | dose independent | rect. | 9 | 19 |
| 990 | 72.57 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 15 |