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Os01g0223200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0272) R2 : 0.7
β1 : -1.28 (0.0996) R2dD : 0.114 R2D : 0.104
β2 : 2.11 (0.0705) R2dC : 0.676 R2C : 0.506
β3 : -1.22 (0.113) R2dE : 0.0884 R2E : -0.0956
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.017 (0.0581) R2dN8 : 7.11e-05 R2N8 : -0.00256
σ : 0.507
deviance : 118.72
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C
peak time of C : 9.76
E
wheather : humidity
threshold : 52
memory length : 1142
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
112.19 0.498 10.3 -1.26 2.13 -1.23 1.4 -0.748 0.0245 9.83 53.09 1137 -- --
112.9 0.495 10.3 -1.32 2.11 -1.25 1.23 -- 0.0178 9.84 52 1149 -- --
118.72 0.507 10.3 -1.28 2.12 -1.23 -- 0.0216 0.0146 9.77 52.07 1138 -- --
118.72 0.507 10.3 -1.28 2.11 -1.22 -- -- 0.017 9.76 52 1142 -- --
321.47 0.835 10.4 -1.12 -- -1.26 -- -0.585 -0.0601 -- 66 1496 -- --
143.34 0.561 10.3 -1.26 1.87 -- 1.02 -- 0.062 9.43 -- -- -- --
147.12 0.568 10.3 -1.22 1.87 -- -- -- 0.0625 9.37 -- -- -- --
321.76 0.835 10.4 -1.22 -- -1.32 -- -- -0.0605 -- 66 1495 -- --
160.16 0.589 10.3 -- 1.86 -1.33 -- -- 0.0629 9.58 71 1391 -- --
351.85 0.876 10.4 -1.23 -- -- -- -- 0.0695 -- -- -- -- --
186.34 0.639 10.3 -- 1.87 -- -- -- 0.198 9.42 -- -- -- --
360.33 0.884 10.4 -- -- -1.45 -- -- 0.0323 -- 71 1500 -- --
391.75 0.924 10.4 -- -- -- -- -- 0.206 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.48 humidity 50 720 > th dose dependent rect. 16 11
3 101.99 humidity 90 720 < th dose dependent rect. 19 3
4 102.29 humidity 60 720 > th dose dependent rect. 18 1
15 103.68 temperature 30 720 < th dose independent rect. 17 2
16 103.87 humidity 60 720 > th dose dependent rect. 17 3
22 104.26 humidity 60 720 > th dose dependent rect. 16 5
27 104.39 humidity 70 720 > th dose independent rect. 16 11
31 104.78 humidity 70 720 > th dose independent rect. 16 4
42 105.11 humidity 80 720 < th dose independent rect. 19 2
48 105.37 temperature 30 720 < th dose independent rect. 17 10
85 106.78 humidity 60 720 > th dose dependent sin 16 NA
170 108.38 humidity 80 720 > th dose independent sin 17 NA
233 109.44 humidity 70 720 > th dose independent sin 13 NA
237 109.48 humidity 90 1440 < th dose dependent rect. 15 9
244 109.61 humidity 80 720 > th dose independent rect. 11 16
270 109.85 humidity 70 1440 > th dose independent rect. 14 17
316 110.01 humidity 90 1440 < th dose dependent sin 15 NA
324 110.13 humidity 70 720 > th dose independent rect. 16 17
459 110.77 humidity 80 720 < th dose independent rect. 11 11
469 110.79 humidity 70 1440 < th dose independent sin 15 NA
475 110.81 humidity 70 1440 < th dose independent rect. 14 6
488 110.81 temperature 30 14400 > th dose dependent rect. 17 2
635 111.25 humidity 50 720 > th dose dependent rect. 15 18
851 111.88 temperature 30 14400 > th dose independent rect. 17 2
899 111.96 temperature 30 14400 > th dose dependent sin 12 NA
903 111.97 temperature 30 14400 < th dose independent rect. 18 3
923 112.03 temperature 30 14400 < th dose independent rect. 18 10
937 112.06 temperature 30 14400 < th dose independent rect. 17 8
975 112.13 temperature 30 720 < th dose independent rect. 16 17
989 112.19 temperature 25 720 > th dose dependent rect. 19 3