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Os01g0222800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.11 (0.0246) R2 : 0.877
β1 : 1.54 (0.0899) R2dD : 0.0827 R2D : 0.0558
β2 : 4.47 (0.0847) R2dC : 1.33 R2C : 0.415
β3 : 2.13 (0.0799) R2dE : 0.337 R2E : -0.529
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.646 (0.0524) R2dN8 : 0.0549 R2N8 : 0.00779
σ : 0.459
deviance : 97.12
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_____
C
peak time of C : 18.6
E
wheather : radiation
threshold : 1.66
memory length : 261
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 1.74
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.06 0.458 7.11 1.58 4.48 2.14 0.686 1.02 0.648 18.5 1.67 264 1.97 --
97.4 0.46 7.12 1.57 4.39 2.03 0.286 -- 0.658 18.7 1.933 246 1.28 --
95.97 0.456 7.11 1.57 4.48 2.16 -- 0.797 0.657 18.5 1.611 264 2.16 --
97.12 0.459 7.11 1.54 4.47 2.13 -- -- 0.646 18.6 1.66 261 1.74 --
669.43 1.21 7.01 1.49 -- 0.799 -- 0.492 0.604 -- 1.611 264 2.16 --
130.35 0.535 7.1 1.54 3.25 -- 0.574 -- 0.637 20.3 -- -- -- --
131.36 0.537 7.1 1.52 3.25 -- -- -- 0.637 20.2 -- -- -- --
131.95 0.535 7.04 1.53 -- -3.63 -- -- 0.544 -- 38.08 729 3.18 --
159.77 0.589 7.15 -- 4.46 2.16 -- -- 0.481 18.5 2.203 253 1.95 --
714.59 1.25 7.01 1.5 -- -- -- -- 0.601 -- -- -- -- --
192.14 0.648 7.14 -- 3.24 -- -- -- 0.468 20.3 -- -- -- --
185.47 0.634 7.05 -- -- -3.51 -- -- 0.434 -- 55.47 715 3.1 --
773.59 1.3 7.05 -- -- -- -- -- 0.435 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.40 temperature 15.0 270 > th dose independent rect. 18 16
3 92.95 wind 7.0 270 < th dose independent rect. 10 8
4 93.13 temperature 15.0 270 > th dose independent rect. 16 8
5 93.63 wind 7.0 270 < th dose independent rect. 11 18
10 93.91 radiation 40.0 270 < th dose independent rect. 5 6
11 94.44 temperature 15.0 270 > th dose independent rect. 6 16
13 94.63 temperature 30.0 270 < th dose independent rect. 18 16
16 94.83 temperature 30.0 270 < th dose independent rect. 5 6
17 95.08 precipitation 0.1 270 < th dose independent rect. 18 16
18 95.08 precipitation 0.1 270 < th dose dependent rect. 18 16
19 95.15 radiation 10.0 270 < th dose dependent rect. 22 8
21 95.33 radiation 1.0 270 < th dose dependent sin 8 NA
24 95.37 radiation 10.0 270 < th dose independent rect. 22 8
25 95.38 temperature 15.0 270 > th dose independent rect. 10 8
29 95.55 radiation 40.0 270 < th dose independent rect. 18 16
30 95.58 atmosphere 995.0 270 > th dose independent rect. 18 16
32 95.62 atmosphere 1015.0 270 < th dose independent rect. 10 8
35 95.63 radiation 40.0 270 < th dose independent rect. 6 17
37 95.68 wind 9.0 270 < th dose independent rect. 22 8
39 95.69 temperature 10.0 270 > th dose independent rect. 22 8
40 95.69 temperature 30.0 270 < th dose independent rect. 22 8
41 95.69 humidity 50.0 270 > th dose independent rect. 22 8
44 95.69 atmosphere 995.0 270 > th dose independent rect. 22 8
49 95.70 radiation 1.0 270 < th dose independent sin 8 NA
52 95.76 precipitation 0.1 270 < th dose independent rect. 5 6
53 95.76 humidity 50.0 270 > th dose independent rect. 18 16
54 95.76 precipitation 0.1 270 < th dose dependent rect. 5 6
56 95.77 wind 9.0 270 < th dose independent rect. 18 16
57 95.80 temperature 10.0 270 > th dose independent rect. 5 6
58 95.80 atmosphere 995.0 270 > th dose independent rect. 5 6
59 95.80 atmosphere 1015.0 270 < th dose independent rect. 5 6
61 95.80 temperature 10.0 270 > th dose independent rect. 11 18
63 95.90 radiation 1.0 270 > th dose independent sin 8 NA
65 95.94 wind 9.0 270 < th dose independent rect. 5 6
66 95.94 precipitation 0.1 270 < th dose independent rect. 10 8
67 95.94 precipitation 0.1 270 < th dose dependent rect. 10 8
69 96.06 wind 7.0 270 < th dose independent rect. 10 20
72 96.12 precipitation 0.1 270 < th dose independent rect. 6 16
73 96.12 precipitation 0.1 270 < th dose dependent rect. 6 16
74 96.20 temperature 10.0 270 > th dose dependent rect. 10 8
79 96.32 atmosphere 1015.0 270 < th dose independent rect. 6 16
85 96.55 radiation 1.0 270 > th dose independent rect. 4 7
97 96.57 humidity 50.0 270 > th dose independent rect. 5 6
106 96.71 wind 1.0 270 > th dose independent rect. 10 8
117 96.98 temperature 30.0 270 < th dose dependent rect. 23 6
121 97.04 radiation 1.0 270 < th dose independent rect. 22 17
124 97.08 temperature 30.0 270 < th dose independent rect. 6 4
133 97.19 precipitation 0.1 270 < th dose independent rect. 22 8
134 97.19 precipitation 0.1 270 < th dose dependent rect. 22 8
144 97.31 radiation 1.0 270 < th dose dependent rect. 23 17
146 97.33 precipitation 0.1 270 < th dose independent rect. 4 8
147 97.33 precipitation 0.1 270 < th dose dependent rect. 4 8
167 97.59 temperature 10.0 270 > th dose independent rect. 4 8
168 97.59 atmosphere 995.0 270 > th dose independent rect. 4 8
169 97.59 atmosphere 1015.0 270 < th dose independent rect. 4 8
170 97.59 temperature 10.0 270 > th dose independent rect. 12 16
172 97.59 wind 9.0 270 < th dose independent rect. 9 22
214 97.82 wind 9.0 270 < th dose independent rect. 6 16
215 97.82 humidity 50.0 270 > th dose dependent rect. 22 8
221 97.87 temperature 10.0 270 > th dose independent rect. 6 4
222 97.87 atmosphere 995.0 270 > th dose independent rect. 6 4
223 97.87 atmosphere 1015.0 270 < th dose independent rect. 6 4
224 97.87 temperature 10.0 270 > th dose independent rect. 10 20
226 97.89 precipitation 0.1 270 < th dose independent rect. 6 4
229 97.89 precipitation 0.1 270 < th dose dependent rect. 6 4
231 97.90 wind 9.0 270 < th dose independent rect. 6 4
254 98.03 radiation 30.0 270 < th dose independent rect. 15 10
256 98.06 humidity 50.0 270 > th dose independent rect. 6 4
260 98.19 precipitation 0.1 270 < th dose independent rect. 11 18
262 98.19 precipitation 0.1 270 < th dose dependent rect. 11 18
274 98.38 wind 9.0 270 < th dose independent rect. 1 15
295 98.62 wind 9.0 270 < th dose dependent rect. 10 8
323 98.88 temperature 30.0 270 < th dose independent rect. 7 2
325 98.88 radiation 40.0 270 < th dose dependent rect. 15 10
327 98.90 radiation 1.0 10 > th dose independent rect. 7 5
335 98.98 atmosphere 995.0 270 > th dose independent rect. 6 16
342 99.04 wind 9.0 10 < th dose independent rect. 12 19
352 99.11 wind 1.0 90 > th dose independent rect. 6 6
358 99.15 atmosphere 995.0 270 > th dose dependent rect. 23 7
373 99.24 temperature 15.0 1440 > th dose independent rect. 8 5
392 99.26 humidity 50.0 270 > th dose independent rect. 16 8
396 99.29 precipitation 0.1 270 < th dose independent rect. 7 2
397 99.29 atmosphere 1015.0 270 < th dose independent rect. 23 7
400 99.29 precipitation 0.1 270 < th dose dependent rect. 7 2
403 99.32 wind 9.0 270 < th dose independent rect. 7 2
404 99.32 temperature 10.0 270 > th dose independent rect. 7 2
406 99.32 humidity 50.0 270 > th dose independent rect. 7 2
407 99.32 atmosphere 995.0 270 > th dose independent rect. 7 2
408 99.32 atmosphere 1015.0 270 < th dose independent rect. 7 2
409 99.32 temperature 10.0 270 > th dose independent rect. 9 22
433 99.39 precipitation 0.1 10 < th dose independent rect. 7 5
434 99.39 precipitation 0.1 10 < th dose dependent rect. 7 5
437 99.42 temperature 30.0 90 < th dose dependent rect. 1 6
442 99.47 atmosphere 995.0 270 > th dose independent rect. 10 8
446 99.47 temperature 10.0 270 > th dose independent rect. 1 15
447 99.47 atmosphere 1015.0 270 < th dose independent rect. 1 15
455 99.54 temperature 10.0 10 > th dose independent rect. 7 5
457 99.54 atmosphere 995.0 10 > th dose independent rect. 7 5
458 99.54 atmosphere 1015.0 10 < th dose independent rect. 7 5
460 99.54 temperature 10.0 10 > th dose independent rect. 12 19
468 99.60 wind 1.0 270 > th dose independent rect. 11 18
488 99.77 wind 1.0 10 > th dose independent rect. 7 5
490 99.79 radiation 1.0 270 > th dose independent rect. 7 2
514 99.89 wind 9.0 10 < th dose independent rect. 7 5
515 99.91 precipitation 0.1 270 < th dose independent rect. 12 16
517 99.91 precipitation 0.1 270 < th dose dependent rect. 12 16
554 100.04 atmosphere 1000.0 90 > th dose independent rect. 1 6
561 100.07 radiation 1.0 270 > th dose independent rect. 10 8
562 100.08 precipitation 0.1 270 < th dose independent rect. 16 9
563 100.08 precipitation 0.1 270 < th dose dependent rect. 16 9
573 100.15 atmosphere 995.0 270 > th dose independent rect. 11 18
590 100.20 humidity 90.0 10 < th dose independent rect. 7 5
592 100.21 precipitation 0.1 270 < th dose independent rect. 10 20
593 100.21 precipitation 0.1 270 < th dose dependent rect. 10 20
614 100.38 atmosphere 995.0 1440 > th dose independent rect. 8 5
615 100.38 temperature 10.0 1440 > th dose independent rect. 13 19
661 100.57 atmosphere 995.0 270 > th dose independent rect. 16 9
664 100.58 atmosphere 995.0 270 > th dose independent rect. 1 14
667 100.59 temperature 15.0 10 > th dose independent rect. 20 16
690 100.69 wind 9.0 270 < th dose independent rect. 16 9
691 100.70 humidity 90.0 90 < th dose independent rect. 6 6
715 100.76 precipitation 0.1 270 < th dose independent rect. 1 15
716 100.76 precipitation 0.1 270 < th dose dependent rect. 1 15
744 100.89 temperature 30.0 270 < th dose dependent rect. 1 3
747 100.90 humidity 50.0 270 > th dose independent rect. 24 15
758 100.94 atmosphere 1015.0 270 < th dose independent rect. 18 16
779 101.04 radiation 20.0 90 < th dose dependent rect. 1 7
818 101.18 atmosphere 995.0 1440 > th dose independent rect. 7 7
820 101.18 temperature 10.0 1440 > th dose independent rect. 14 17
833 101.25 radiation 40.0 270 < th dose dependent rect. 6 17
837 101.26 wind 9.0 270 < th dose dependent rect. 6 4
842 101.28 temperature 15.0 270 > th dose independent rect. 4 21
903 101.50 radiation 40.0 270 < th dose dependent rect. 6 4
915 101.56 wind 1.0 270 > th dose independent rect. 23 7
939 101.70 radiation 40.0 90 < th dose independent rect. 12 18
941 101.71 humidity 90.0 270 < th dose independent rect. 10 7
943 101.72 wind 1.0 270 > th dose independent rect. 16 9
985 101.95 radiation 40.0 270 < th dose dependent rect. 7 2
989 101.96 wind 9.0 270 < th dose dependent rect. 22 8