Os01g0222700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, BED-type predicted domain containing protein.
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Os01g0222700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, BED-type predicted domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.37 | 0.454 | 9.47 | 0.176 | 2.23 | 2.13 | -0.196 | -2.25 | 0.297 | 19.8 | 0.9518 | 756 | -- | -- |
| 96.3 | 0.457 | 9.49 | 0.145 | 2.2 | 2.07 | 0.948 | -- | 0.272 | 19.9 | 0.95 | 779 | -- | -- |
| 93.32 | 0.45 | 9.47 | 0.176 | 2.22 | 2.11 | -- | -2.03 | 0.298 | 19.8 | 0.9598 | 764 | -- | -- |
| 95.27 | 0.455 | 9.48 | 0.0752 | 2.16 | 1.91 | -- | -- | 0.286 | 20.8 | 0.98 | 938 | -- | -- |
| 114.03 | 0.5 | 9.43 | -0.011 | -- | 0.767 | -- | -0.28 | 0.221 | -- | 0.9598 | 764 | -- | -- |
| 108.6 | 0.489 | 9.46 | -0.043 | 1.08 | -- | 0.0392 | -- | 0.205 | 22.6 | -- | -- | -- | -- |
| 108.6 | 0.488 | 9.46 | -0.0447 | 1.08 | -- | -- | -- | 0.205 | 22.6 | -- | -- | -- | -- |
| 114.53 | 0.501 | 9.43 | -0.0141 | -- | 0.766 | -- | -- | 0.22 | -- | 0.9598 | 764 | -- | -- |
| 95.31 | 0.455 | 9.49 | -- | 2.31 | 2.09 | -- | -- | 0.314 | 20.8 | 0.98 | 938 | -- | -- |
| 180.41 | 0.628 | 9.44 | -0.0249 | -- | -- | -- | -- | 0.21 | -- | -- | -- | -- | -- |
| 108.66 | 0.488 | 9.46 | -- | 1.08 | -- | -- | -- | 0.21 | 22.6 | -- | -- | -- | -- |
| 114.54 | 0.5 | 9.43 | -- | -- | 0.766 | -- | -- | 0.222 | -- | 0.9598 | 764 | -- | -- |
| 180.42 | 0.627 | 9.44 | -- | -- | -- | -- | -- | 0.213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.83 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 2 | 88.12 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 3 | 88.22 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 6 | 88.98 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 8 | 89.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 23 | 89.18 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 26 | 89.20 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 48 | 89.43 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 62 | 89.65 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 66 | 89.72 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 67 | 89.73 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 76 | 89.91 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 112 | 90.47 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 124 | 90.58 | humidity | 90.0 | 720 | > th | dose independent | rect. | 18 | 5 |
| 134 | 90.68 | precipitation | 0.1 | 270 | < th | dose independent | sin | 7 | NA |
| 137 | 90.68 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 7 | NA |
| 146 | 90.77 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 200 | 91.27 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 226 | 91.47 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 10 |
| 253 | 91.58 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 266 | 91.61 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 11 |
| 268 | 91.62 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 278 | 91.65 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 306 | 91.76 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 353 | 91.97 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 366 | 92.04 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 405 | 92.22 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 481 | 92.51 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 13 |
| 492 | 92.55 | radiation | 1.0 | 720 | < th | dose independent | rect. | 21 | 22 |
| 530 | 92.67 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 538 | 92.69 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 609 | 92.91 | humidity | 60.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 647 | 93.03 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 670 | 93.10 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 22 |
| 675 | 93.12 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 688 | 93.15 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 690 | 93.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 777 | 93.35 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 780 | 93.36 | humidity | 90.0 | 720 | < th | dose independent | sin | 14 | NA |
| 856 | 93.50 | precipitation | 0.1 | 720 | < th | dose independent | sin | 11 | NA |
| 857 | 93.50 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 860 | 93.50 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 21 |
| 861 | 93.50 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 11 | NA |
| 868 | 93.51 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 899 | 93.58 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 950 | 93.67 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 966 | 93.70 | humidity | 70.0 | 1440 | > th | dose independent | sin | 8 | NA |