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Os01g0221900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0274) R2 : 0.795
β1 : 1.92 (0.104) R2dD : 0.174 R2D : 0.112
β2 : 2.39 (0.0674) R2dC : 0.581 R2C : 0.624
β3 : 1.93 (0.183) R2dE : 0.0567 R2E : 0.0477
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.287 (0.0596) R2dN8 : 0.0147 R2N8 : -0.0184
σ : 0.508
deviance : 119.19
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C
peak time of C : 21.5
E
wheather : temperature
threshold : 20.78
memory length : 35
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
113.39 0.5 10.1 1.96 2.39 1.36 -0.946 -1.56 0.304 21.5 21.41 30 -- --
114.8 0.499 10.1 1.88 2.4 1.88 -1.09 -- 0.287 21.5 20.8 37 -- --
116.36 0.506 10.1 2.02 2.39 1.24 -- -2.09 0.31 21.5 21.41 30 -- --
119.19 0.508 10.1 1.92 2.39 1.93 -- -- 0.287 21.5 20.78 35 -- --
429.43 0.97 9.99 2.32 -- 2.03 -- -1.47 0.599 -- 25.16 4 -- --
141.44 0.558 10.2 1.56 2.48 -- -1.23 -- 0.138 21.6 -- -- -- --
147.15 0.568 10.2 1.6 2.48 -- -- -- 0.14 21.7 -- -- -- --
431.06 0.967 10 2.11 -- 2.39 -- -- 0.461 -- 23.3 2 -- --
207.84 0.675 10.2 -- 2.44 0.868 -- -- 0.0179 21.6 21.1 20 -- --
513.02 1.06 10.1 1.62 -- -- -- -- 0.135 -- -- -- -- --
214.74 0.685 10.2 -- 2.49 -- -- -- -0.0388 21.7 -- -- -- --
539.72 1.09 10.1 -- -- 1.68 -- -- 0.142 -- 23.2 4 -- --
582.5 1.13 10.2 -- -- -- -- -- -0.0446 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 108.09 temperature 15 14400 > th dose independent sin 23 NA
2 108.14 temperature 15 14400 < th dose independent sin 0 NA
3 108.15 temperature 15 14400 < th dose independent rect. 4 19
4 108.20 temperature 15 14400 > th dose independent rect. 6 15
7 108.28 temperature 15 14400 < th dose independent rect. 6 4
9 108.30 temperature 15 14400 < th dose independent rect. 5 16
12 108.36 temperature 15 14400 > th dose independent rect. 5 18
17 108.43 temperature 15 14400 < th dose independent rect. 5 13
21 108.46 temperature 15 14400 > th dose independent rect. 6 12
24 108.50 temperature 15 14400 > th dose independent sin 18 NA
28 108.53 temperature 15 14400 < th dose independent sin 17 NA
34 108.59 temperature 15 14400 > th dose independent rect. 12 13
38 108.63 temperature 15 14400 > th dose independent rect. 15 10
56 108.75 temperature 15 14400 < th dose independent rect. 14 12
57 108.75 temperature 15 14400 < th dose independent rect. 12 15
70 108.80 temperature 15 14400 < th dose independent rect. 15 10
106 109.00 temperature 15 14400 > th dose independent rect. 18 6
120 109.04 temperature 15 14400 < th dose independent rect. 5 6
127 109.07 temperature 15 14400 < th dose independent rect. 20 2
150 109.18 temperature 15 14400 < th dose independent rect. 18 6
182 109.32 temperature 15 14400 < th dose independent rect. 10 23
191 109.39 temperature 15 14400 < th dose independent no NA NA
201 109.43 temperature 15 14400 < th dose independent rect. 21 23
206 109.48 temperature 15 14400 < th dose independent rect. 14 23
207 109.49 temperature 15 14400 > th dose independent rect. 6 5
213 109.51 temperature 15 14400 > th dose independent rect. 20 2
224 109.53 temperature 15 14400 < th dose independent rect. 19 23
323 109.99 temperature 15 14400 < th dose independent rect. 7 14
415 110.48 temperature 15 14400 < th dose independent rect. 22 2
461 110.73 temperature 15 14400 < th dose dependent rect. 9 1
487 110.85 temperature 15 14400 > th dose independent rect. 10 23
492 110.86 temperature 15 14400 > th dose independent rect. 21 23
500 110.91 temperature 15 14400 > th dose independent no NA NA
527 111.03 temperature 15 14400 > th dose independent rect. 14 23
543 111.07 temperature 15 14400 > th dose independent rect. 18 23
598 111.32 temperature 15 14400 < th dose dependent rect. 5 16
617 111.39 temperature 15 14400 < th dose dependent rect. 9 8
649 111.51 temperature 15 14400 < th dose dependent sin 22 NA
689 111.63 temperature 15 14400 < th dose dependent rect. 20 2
719 111.77 temperature 15 14400 < th dose dependent rect. 11 3
736 111.82 temperature 15 14400 < th dose dependent rect. 7 16
740 111.83 temperature 15 14400 < th dose dependent rect. 9 13
755 111.88 humidity 50 43200 > th dose independent rect. 24 5
794 112.04 temperature 15 14400 < th dose dependent rect. 7 4
816 112.12 temperature 15 14400 < th dose dependent rect. 12 11
835 112.20 radiation 1 4320 > th dose independent rect. 9 1
881 112.37 humidity 50 43200 < th dose dependent rect. 18 2
894 112.45 temperature 15 14400 > th dose independent rect. 24 3
915 112.55 humidity 50 43200 < th dose independent sin 12 NA
950 112.73 temperature 15 14400 < th dose dependent rect. 6 1
964 112.82 temperature 15 14400 < th dose independent rect. 12 1
970 112.84 radiation 1 4320 < th dose independent rect. 9 1
973 112.84 radiation 1 4320 < th dose dependent rect. 9 1
989 112.92 humidity 50 43200 < th dose dependent rect. 17 14
995 112.94 temperature 15 14400 < th dose independent rect. 11 7
997 112.95 humidity 50 43200 > th dose independent sin 12 NA