Os01g0220000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0220000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.71 | 0.567 | 7.39 | -0.555 | 0.733 | 0.965 | -0.823 | -0.396 | -0.538 | 9.98 | 79 | 268 | -- | -- |
| 145.84 | 0.562 | 7.39 | -0.53 | 0.724 | 0.916 | -0.873 | -- | -0.539 | 9.95 | 80.76 | 261 | -- | -- |
| 147.8 | 0.566 | 7.39 | -0.561 | 0.757 | 0.953 | -- | -1.27 | -0.53 | 11 | 70.68 | 246 | -- | -- |
| 148.63 | 0.568 | 7.39 | -0.563 | 0.731 | 0.869 | -- | -- | -0.538 | 10.3 | 78.85 | 267 | -- | -- |
| 166 | 0.603 | 7.41 | -0.54 | -- | 1.2 | -- | -0.826 | -0.521 | -- | 84 | 47 | -- | -- |
| 158.1 | 0.589 | 7.4 | -0.461 | 0.821 | -- | -0.565 | -- | -0.559 | 12 | -- | -- | -- | -- |
| 159.42 | 0.591 | 7.4 | -0.482 | 0.824 | -- | -- | -- | -0.56 | 12.2 | -- | -- | -- | -- |
| 166.37 | 0.603 | 7.42 | -0.494 | -- | 1.18 | -- | -- | -0.58 | -- | 96.12 | 13 | -- | -- |
| 156.14 | 0.582 | 7.39 | -- | 0.756 | 0.897 | -- | -- | -0.525 | 9.92 | 126.4 | 267 | -- | -- |
| 202.14 | 0.664 | 7.42 | -0.509 | -- | -- | -- | -- | -0.573 | -- | -- | -- | -- | -- |
| 165.55 | 0.602 | 7.39 | -- | 0.831 | -- | -- | -- | -0.507 | 12.2 | -- | -- | -- | -- |
| 172.67 | 0.612 | 7.41 | -- | -- | 1.16 | -- | -- | -0.526 | -- | 229.9 | 5 | -- | -- |
| 208.98 | 0.675 | 7.41 | -- | -- | -- | -- | -- | -0.516 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.70 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 3 | 138.77 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 4 | 138.79 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 8 |
| 6 | 139.10 | humidity | 70.0 | 30 | > th | dose independent | rect. | 12 | 13 |
| 8 | 139.38 | radiation | 1.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 12 | 139.80 | humidity | 70.0 | 10 | > th | dose independent | rect. | 17 | 8 |
| 14 | 139.90 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 17 | 140.00 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 5 | 20 |
| 19 | 140.06 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 8 |
| 22 | 140.10 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 8 |
| 24 | 140.13 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 29 | 140.26 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 34 | 140.45 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 18 |
| 38 | 140.59 | humidity | 70.0 | 30 | > th | dose independent | sin | 15 | NA |
| 43 | 140.71 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 45 | 140.74 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 17 |
| 56 | 140.94 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 58 | 140.98 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 8 |
| 76 | 141.36 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 77 | 141.36 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 79 | 141.43 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 22 |
| 80 | 141.47 | humidity | 70.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 83 | 141.50 | humidity | 60.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 89 | 141.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 94 | 141.65 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 24 | 8 |
| 110 | 142.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 111 | 142.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 112 | 142.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 123 | 142.17 | humidity | 60.0 | 270 | > th | dose independent | rect. | 5 | 17 |
| 133 | 142.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 136 | 142.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 141 | 142.35 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 142 | 142.35 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 4 |
| 153 | 142.52 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 17 | 8 |
| 156 | 142.55 | humidity | 70.0 | 90 | < th | dose independent | rect. | 15 | 5 |
| 204 | 142.79 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 211 | 142.84 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 215 | 142.89 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 218 | 142.89 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 230 | 142.98 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 235 | 143.03 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 19 |
| 240 | 143.06 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 20 |
| 247 | 143.10 | humidity | 50.0 | 30 | > th | dose dependent | sin | 16 | NA |
| 263 | 143.22 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 11 | 14 |
| 270 | 143.23 | humidity | 80.0 | 30 | < th | dose dependent | sin | 15 | NA |
| 272 | 143.23 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 276 | 143.24 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 21 |
| 280 | 143.27 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 13 | 12 |
| 291 | 143.31 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 322 | 143.41 | radiation | 1.0 | 30 | < th | dose independent | rect. | 17 | 8 |
| 329 | 143.42 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 351 | 143.48 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 360 | 143.51 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 365 | 143.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 368 | 143.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 385 | 143.60 | humidity | 70.0 | 30 | < th | dose independent | sin | 14 | NA |
| 464 | 143.84 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 19 |
| 508 | 143.97 | radiation | 1.0 | 30 | < th | dose independent | rect. | 11 | 14 |
| 521 | 144.00 | humidity | 70.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 527 | 144.02 | radiation | 1.0 | 30 | < th | dose independent | rect. | 13 | 12 |
| 553 | 144.09 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 566 | 144.11 | humidity | 70.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 609 | 144.17 | humidity | 80.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 641 | 144.24 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 14 |
| 697 | 144.36 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 698 | 144.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 699 | 144.36 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 17 |
| 752 | 144.48 | humidity | 70.0 | 270 | < th | dose independent | rect. | 13 | 19 |
| 755 | 144.48 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 772 | 144.51 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 9 | 15 |
| 787 | 144.54 | humidity | 70.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 818 | 144.59 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 6 |
| 822 | 144.60 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 825 | 144.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 827 | 144.60 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 844 | 144.64 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 859 | 144.66 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 864 | 144.67 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 882 | 144.70 | humidity | 70.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 901 | 144.72 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 13 | 15 |
| 906 | 144.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 949 | 144.77 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 17 |
| 967 | 144.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 973 | 144.81 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 8 |
| 988 | 144.84 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 16 |
| 990 | 144.84 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 991 | 144.85 | humidity | 70.0 | 270 | < th | dose independent | sin | 18 | NA |
| 997 | 144.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |