Os01g0217300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0217300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase C1A, papain family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.41 | 0.668 | 8.66 | -0.142 | 0.708 | 2.34 | -0.0626 | 1.37 | -0.975 | 8.39 | 23.66 | 2236 | -- | -- |
| 204.53 | 0.666 | 8.62 | 0.128 | 0.73 | 2.11 | -0.0338 | -- | -0.903 | 8.31 | 24.22 | 2309 | -- | -- |
| 202.41 | 0.663 | 8.66 | -0.14 | 0.709 | 2.33 | -- | 1.35 | -0.971 | 8.35 | 23.7 | 2250 | -- | -- |
| 204.47 | 0.666 | 8.62 | 0.108 | 0.715 | 2.09 | -- | -- | -0.91 | 8.25 | 24.22 | 2306 | -- | -- |
| 229.62 | 0.706 | 8.67 | -0.0947 | -- | 2.36 | -- | 1.21 | -0.918 | -- | 24.88 | 2195 | -- | -- |
| 281.52 | 0.787 | 8.73 | -0.743 | 0.814 | -- | 0.00675 | -- | -1.43 | 8.93 | -- | -- | -- | -- |
| 281.52 | 0.786 | 8.73 | -0.743 | 0.814 | -- | -- | -- | -1.43 | 8.93 | -- | -- | -- | -- |
| 230.8 | 0.708 | 8.63 | 0.14 | -- | 2.23 | -- | -- | -0.863 | -- | 25.2 | 2217 | -- | -- |
| 204.68 | 0.666 | 8.62 | -- | 0.712 | 2.02 | -- | -- | -0.922 | 8.21 | 24.56 | 2306 | -- | -- |
| 319.44 | 0.835 | 8.75 | -0.743 | -- | -- | -- | -- | -1.43 | -- | -- | -- | -- | -- |
| 296.06 | 0.805 | 8.71 | -- | 0.813 | -- | -- | -- | -1.35 | 9 | -- | -- | -- | -- |
| 231.16 | 0.708 | 8.63 | -- | -- | 2.17 | -- | -- | -0.892 | -- | 25.3 | 2204 | -- | -- |
| 334.01 | 0.853 | 8.74 | -- | -- | -- | -- | -- | -1.34 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 22 | 203.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 32 | 203.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 38 | 203.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 39 | 203.90 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 79 | 204.73 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 87 | 204.85 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 114 | 205.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 11 |
| 160 | 205.92 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 176 | 206.16 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 196 | 206.34 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 250 | 206.79 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 255 | 206.81 | wind | 9 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 297 | 207.10 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 328 | 207.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 348 | 207.42 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 393 | 207.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 401 | 207.76 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 449 | 207.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 484 | 208.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 500 | 208.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 529 | 208.42 | wind | 9 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 544 | 208.50 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 798 | 209.85 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 824 | 210.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 927 | 210.46 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 14 |