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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0217200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.27 (0.0224) R2 : 6.85e-07
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.000833 (0.0472) R2dN8 : 8.85e-07 R2N8 : 6.85e-07
σ : 0.422
deviance : 81.67
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.09 0.415 3.27 0.0134 0.0927 0.466 -0.349 0.725 0.0499 4.27 24.1 858 -- --
78.71 0.413 3.25 0.133 0.0965 0.397 -0.402 -- 0.0776 3.75 24.5 1015 -- --
78.42 0.412 3.27 0.00904 0.095 0.474 -- 0.787 0.0506 4.38 24.05 904 -- --
78.87 0.414 3.25 0.172 0.0878 0.373 -- -- 0.0896 5.55 23.98 2213 -- --
78.87 0.414 3.27 0.0164 -- 0.468 -- 0.781 0.053 -- 24.01 840 -- --
80.95 0.422 3.27 0.0217 0.0809 -- -0.37 -- -0.00182 4.5 -- -- -- --
81.15 0.422 3.27 0.0251 0.0974 -- -- -- 0.000249 6.65 -- -- -- --
79.33 0.415 3.25 0.172 -- 0.371 -- -- 0.0907 -- 24 2190 -- --
79.48 0.415 3.26 -- 0.0964 0.284 -- -- 0.0536 5.82 24.13 2203 -- --
81.65 0.422 3.27 0.0274 -- -- -- -- 0.0022 -- -- -- -- --
81.17 0.421 3.27 -- 0.0977 -- -- -- -0.00255 6.64 -- -- -- --
79.95 0.416 3.26 -- -- 0.289 -- -- 0.0557 -- 24.25 2148 -- --
81.67 0.422 3.27 -- -- -- -- -- -0.000833 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 73.72 temperature 15.0 30 > th dose independent rect. 23 23
2 73.73 temperature 25.0 30 > th dose dependent rect. 22 1
3 73.76 humidity 90.0 30 < th dose dependent rect. 22 1
4 73.79 humidity 90.0 30 < th dose independent rect. 22 1
5 73.81 wind 9.0 1440 < th dose independent rect. 23 1
6 73.81 temperature 10.0 1440 > th dose independent rect. 23 1
9 73.81 temperature 30.0 1440 < th dose independent rect. 23 1
13 73.81 humidity 50.0 1440 > th dose independent rect. 23 1
23 73.81 atmosphere 1005.0 30 > th dose independent rect. 22 1
24 73.81 atmosphere 995.0 1440 > th dose independent rect. 23 1
25 73.81 radiation 1.0 1440 < th dose independent rect. 23 1
45 73.81 temperature 10.0 1440 > th dose independent rect. 24 23
48 73.81 atmosphere 1005.0 30 > th dose dependent rect. 22 1
49 73.81 radiation 1.0 1440 < th dose dependent rect. 23 1
54 73.82 wind 1.0 30 > th dose independent rect. 22 1
58 73.84 temperature 25.0 30 > th dose independent rect. 22 1
59 73.84 temperature 10.0 30 > th dose dependent rect. 22 1
61 73.85 wind 5.0 30 < th dose independent rect. 22 1
64 73.85 temperature 10.0 30 > th dose independent rect. 22 1
67 73.85 temperature 30.0 30 < th dose independent rect. 22 1
68 73.85 humidity 50.0 30 > th dose independent rect. 22 1
71 73.85 atmosphere 995.0 30 > th dose independent rect. 22 1
72 73.85 atmosphere 1010.0 30 < th dose independent rect. 22 1
74 73.85 radiation 1.0 30 < th dose independent rect. 22 1
80 73.85 radiation 1.0 30 < th dose dependent rect. 22 1
86 73.86 precipitation 0.1 30 < th dose independent rect. 22 1
87 73.86 wind 9.0 30 < th dose dependent rect. 22 1
88 73.86 precipitation 0.1 30 < th dose dependent rect. 22 1
90 73.88 wind 1.0 30 > th dose dependent rect. 22 1
92 73.88 humidity 50.0 30 > th dose dependent rect. 22 1
103 73.95 atmosphere 1015.0 30 < th dose dependent rect. 22 1
104 73.96 wind 9.0 30 < th dose independent rect. 23 23
105 73.96 temperature 30.0 30 < th dose dependent rect. 22 1
151 74.28 atmosphere 995.0 30 > th dose independent rect. 23 23
177 75.51 precipitation 0.1 30 < th dose independent rect. 23 23
178 75.51 precipitation 0.1 30 < th dose dependent rect. 23 23
179 75.58 precipitation 0.1 1440 < th dose independent rect. 23 1
180 75.58 precipitation 0.1 1440 < th dose dependent rect. 23 1
193 76.23 precipitation 0.1 720 < th dose independent rect. 15 8
194 76.23 precipitation 0.1 720 < th dose dependent rect. 15 8
195 76.25 temperature 10.0 720 > th dose independent rect. 3 8
196 76.25 atmosphere 995.0 720 > th dose independent rect. 3 8
197 76.25 temperature 10.0 720 > th dose independent rect. 11 16
198 76.35 wind 9.0 720 < th dose independent rect. 3 8
199 76.36 temperature 10.0 30 > th dose dependent rect. 23 23
202 76.43 humidity 90.0 10 < th dose independent rect. 4 1
204 76.43 temperature 10.0 720 > th dose independent rect. 15 8
205 76.43 temperature 10.0 720 > th dose independent rect. 23 16
206 76.45 atmosphere 995.0 720 > th dose independent rect. 23 16
208 76.47 atmosphere 1015.0 720 < th dose independent rect. 3 8
213 76.52 humidity 50.0 720 > th dose independent rect. 3 8
224 76.67 radiation 40.0 30 < th dose dependent rect. 23 23
227 76.69 humidity 50.0 30 > th dose independent rect. 23 23
251 76.76 precipitation 0.1 720 < th dose independent rect. 11 16
252 76.76 precipitation 0.1 720 < th dose dependent rect. 11 16
258 76.82 wind 1.0 30 > th dose independent rect. 4 1
263 76.87 atmosphere 1005.0 90 < th dose independent rect. 10 1
268 76.93 atmosphere 1005.0 10 > th dose dependent rect. 4 1
271 76.97 radiation 10.0 30 < th dose independent rect. 23 23
273 77.02 humidity 50.0 720 > th dose independent rect. 23 16
279 77.04 temperature 25.0 720 > th dose dependent rect. 5 3
283 77.12 wind 1.0 30 > th dose dependent rect. 4 1
288 77.19 wind 9.0 720 < th dose independent rect. 15 8
293 77.24 atmosphere 1005.0 270 < th dose independent rect. 8 3
295 77.28 atmosphere 995.0 720 > th dose independent rect. 11 16
296 77.29 temperature 25.0 10 > th dose independent rect. 4 1
297 77.29 radiation 40.0 720 < th dose independent rect. 15 8
300 77.31 radiation 1.0 720 < th dose dependent rect. 1 7
301 77.34 temperature 25.0 30 > th dose dependent rect. 4 1
307 77.39 precipitation 0.1 720 < th dose independent rect. 23 16
308 77.39 precipitation 0.1 720 < th dose dependent rect. 23 16
310 77.41 precipitation 0.1 720 < th dose independent rect. 3 8
313 77.41 precipitation 0.1 720 < th dose dependent rect. 3 8
316 77.43 atmosphere 995.0 720 > th dose independent rect. 15 8
318 77.48 wind 9.0 720 < th dose independent rect. 23 16
319 77.48 radiation 40.0 30 < th dose independent rect. 23 23
329 77.55 atmosphere 1005.0 30 > th dose dependent rect. 2 3
332 77.59 atmosphere 1000.0 90 > th dose independent rect. 23 12
347 77.65 wind 7.0 720 < th dose independent rect. 17 12
350 77.66 temperature 15.0 720 > th dose dependent rect. 23 1
352 77.68 wind 1.0 43200 < th dose dependent rect. 6 1
361 77.74 temperature 25.0 720 > th dose independent rect. 5 4
373 77.79 temperature 25.0 720 > th dose independent rect. 5 6
374 77.79 atmosphere 1015.0 30 < th dose independent rect. 23 23
375 77.80 radiation 30.0 10 < th dose independent rect. 24 11
376 77.80 atmosphere 1000.0 720 > th dose independent rect. 21 14
378 77.81 wind 7.0 720 < th dose independent rect. 15 14
385 77.84 temperature 20.0 720 > th dose dependent rect. 23 12
389 77.87 temperature 30.0 30 < th dose dependent rect. 4 1
391 77.88 atmosphere 1000.0 10 > th dose independent rect. 24 11
393 77.89 wind 3.0 720 > th dose independent rect. 11 1
396 77.89 wind 1.0 720 > th dose independent rect. 15 8
398 77.90 wind 5.0 10 < th dose independent rect. 4 1
407 77.93 radiation 1.0 720 < th dose independent rect. 1 7
408 77.93 wind 7.0 720 < th dose independent rect. 13 16
412 77.94 temperature 10.0 30 > th dose independent rect. 4 1
414 77.94 temperature 30.0 30 < th dose independent rect. 4 1
415 77.94 humidity 50.0 30 > th dose independent rect. 4 1
418 77.94 atmosphere 995.0 30 > th dose independent rect. 4 1
419 77.94 atmosphere 1010.0 30 < th dose independent rect. 4 1
421 77.94 radiation 1.0 30 < th dose independent rect. 4 1
428 77.94 temperature 10.0 30 > th dose independent rect. 5 23
429 77.94 radiation 10.0 30 < th dose dependent rect. 4 1
434 77.95 atmosphere 1005.0 30 > th dose independent rect. 4 1
435 77.95 atmosphere 1000.0 720 > th dose independent rect. 23 10
443 77.96 temperature 25.0 90 > th dose independent rect. 2 3
445 77.96 temperature 25.0 720 < th dose dependent rect. 21 18
447 77.97 precipitation 0.1 30 < th dose independent rect. 4 1
451 77.97 temperature 10.0 30 > th dose dependent rect. 4 1
452 77.97 precipitation 0.1 30 < th dose dependent rect. 4 1
454 77.97 temperature 25.0 720 < th dose dependent rect. 21 12
475 77.98 humidity 90.0 10 < th dose dependent rect. 4 1
481 77.98 temperature 10.0 720 > th dose dependent rect. 23 12
482 77.98 radiation 1.0 720 < th dose dependent rect. 1 12
489 77.99 temperature 25.0 90 > th dose independent rect. 20 9
496 77.99 atmosphere 995.0 10 > th dose dependent rect. 24 22
500 78.00 wind 1.0 14400 < th dose dependent rect. 4 4
508 78.01 temperature 30.0 720 < th dose independent rect. 17 6
521 78.03 atmosphere 1000.0 720 > th dose independent rect. 23 8
527 78.04 temperature 25.0 720 < th dose dependent sin 8 NA
528 78.04 humidity 50.0 30 > th dose dependent rect. 4 1
534 78.04 wind 1.0 14400 < th dose dependent rect. 4 18
539 78.05 radiation 10.0 720 > th dose independent rect. 5 4
552 78.05 wind 9.0 10 < th dose dependent rect. 4 1
558 78.06 temperature 25.0 720 > th dose independent rect. 10 1
565 78.06 atmosphere 1015.0 43200 > th dose dependent rect. 11 5
569 78.07 wind 1.0 14400 > th dose independent rect. 4 11
572 78.07 atmosphere 1015.0 43200 > th dose dependent rect. 12 2
575 78.07 atmosphere 1015.0 43200 > th dose dependent rect. 10 8
581 78.08 wind 1.0 14400 < th dose independent rect. 4 4
594 78.09 wind 1.0 14400 > th dose independent rect. 4 18
598 78.09 wind 1.0 14400 < th dose dependent rect. 4 11
602 78.10 wind 3.0 14400 > th dose independent rect. 10 2
603 78.10 wind 1.0 14400 > th dose independent rect. 4 4
605 78.10 wind 1.0 14400 < th dose independent rect. 4 11
607 78.10 temperature 25.0 4320 < th dose dependent rect. 12 1
619 78.11 atmosphere 1015.0 30 < th dose dependent rect. 4 1
634 78.12 wind 1.0 14400 > th dose independent rect. 2 13
636 78.12 wind 1.0 14400 < th dose independent rect. 4 18
652 78.13 atmosphere 1015.0 43200 > th dose dependent sin 19 NA
655 78.13 radiation 1.0 720 < th dose dependent rect. 5 2
665 78.14 humidity 70.0 270 > th dose independent rect. 10 1
670 78.14 temperature 20.0 720 < th dose independent rect. 3 5
673 78.14 wind 1.0 14400 > th dose independent rect. 20 12
677 78.14 wind 1.0 14400 > th dose independent rect. 1 21
689 78.15 wind 3.0 14400 < th dose independent rect. 11 1
697 78.15 temperature 25.0 90 > th dose dependent rect. 2 3
717 78.16 atmosphere 1000.0 720 > th dose independent rect. 5 6
719 78.16 wind 1.0 14400 < th dose independent rect. 2 13
720 78.16 wind 1.0 14400 > th dose independent rect. 18 14
723 78.16 wind 1.0 14400 > th dose independent rect. 20 18
728 78.16 wind 1.0 14400 < th dose dependent rect. 3 8
747 78.17 wind 1.0 14400 > th dose independent sin 7 NA
748 78.17 wind 1.0 14400 > th dose independent sin 5 NA
753 78.17 wind 1.0 14400 > th dose independent rect. 4 8
785 78.18 temperature 25.0 720 > th dose independent rect. 8 3
791 78.18 wind 1.0 14400 > th dose independent rect. 20 15
795 78.18 precipitation 0.1 30 < th dose independent rect. 5 23
818 78.18 precipitation 0.1 30 < th dose dependent rect. 5 23
823 78.19 atmosphere 1015.0 43200 < th dose independent rect. 13 7
859 78.20 atmosphere 1005.0 720 > th dose independent rect. 5 4
861 78.20 temperature 25.0 10 > th dose independent rect. 22 8
862 78.20 atmosphere 1015.0 43200 > th dose independent rect. 12 9
871 78.20 wind 1.0 14400 < th dose independent rect. 2 20
872 78.20 wind 9.0 30 < th dose independent rect. 5 23
873 78.20 wind 5.0 14400 < th dose dependent rect. 10 1
928 78.22 atmosphere 1015.0 43200 < th dose independent rect. 14 2
929 78.22 atmosphere 1015.0 43200 > th dose independent rect. 13 3
931 78.22 atmosphere 1015.0 43200 < th dose independent rect. 13 5
932 78.22 atmosphere 1015.0 43200 > th dose independent rect. 12 6
949 78.22 temperature 20.0 4320 > th dose independent rect. 5 18
961 78.22 temperature 10.0 720 > th dose dependent rect. 3 8
964 78.22 temperature 15.0 30 > th dose dependent rect. 23 12
981 78.23 wind 7.0 1440 < th dose independent rect. 5 1
983 78.23 temperature 10.0 1440 > th dose independent rect. 5 1
987 78.23 temperature 30.0 1440 < th dose independent rect. 5 1
991 78.23 humidity 50.0 1440 > th dose independent rect. 5 1
1000 78.23 atmosphere 995.0 1440 > th dose independent rect. 5 1