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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0216400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.0215) R2 : 0.000556
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0228 (0.0452) R2dN8 : 0.000718 R2N8 : 0.000556
σ : 0.404
deviance : 75.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
70.66 0.395 2.92 -0.109 0.0661 1.15 -0.171 2.25 -0.0185 11.6 19.03 678 -- --
72.87 0.398 2.9 -0.0792 0.0886 0.476 0.0876 -- -0.0174 10.5 18 550 -- --
70.22 0.39 2.94 -0.0759 0.0771 2.08 -- 3.87 -0.0248 12.4 18.93 412 -- --
72.86 0.398 2.9 -0.0785 0.103 0.435 -- -- -0.0189 11.1 18 537 -- --
70.52 0.391 2.93 -0.0818 -- 2.29 -- 4.41 -0.0155 -- 18.86 422 -- --
73.75 0.403 2.9 -0.131 0.118 -- 0.0438 -- -0.0366 11.1 -- -- -- --
73.76 0.402 2.9 -0.129 0.118 -- -- -- -0.0364 11.1 -- -- -- --
73.49 0.399 2.9 -0.0677 -- 0.447 -- -- -0.015 -- 18.38 639 -- --
73 0.398 2.9 -- 0.1 0.468 -- -- -0.00752 11.2 18.52 537 -- --
74.62 0.404 2.91 -0.132 -- -- -- -- -0.0374 -- -- -- -- --
74.2 0.403 2.9 -- 0.119 -- -- -- -0.022 11.2 -- -- -- --
73.6 0.4 2.9 -- -- 0.481 -- -- -0.00506 -- 18.6 639 -- --
75.08 0.404 2.9 -- -- -- -- -- -0.0228 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 65.13 wind 9.0 30 < th dose independent rect. 11 23
2 65.62 wind 5.0 90 > th dose independent rect. 5 2
4 65.62 wind 5.0 90 > th dose dependent rect. 5 2
7 65.63 radiation 20.0 90 > th dose independent rect. 6 1
22 65.63 radiation 20.0 90 > th dose dependent rect. 6 1
42 65.85 temperature 25.0 30 > th dose dependent rect. 10 1
44 65.87 temperature 25.0 30 > th dose independent rect. 10 1
45 65.88 wind 1.0 30 < th dose independent rect. 10 1
46 65.88 temperature 10.0 1440 > th dose independent rect. 11 1
50 65.88 atmosphere 995.0 1440 > th dose independent rect. 11 1
53 65.88 precipitation 0.1 1440 < th dose independent rect. 11 1
54 65.88 temperature 10.0 1440 > th dose independent rect. 12 23
57 65.88 wind 1.0 30 < th dose dependent rect. 10 1
58 65.88 precipitation 0.1 1440 < th dose dependent rect. 11 1
61 65.90 humidity 70.0 30 < th dose independent rect. 10 1
62 65.96 radiation 20.0 30 > th dose independent rect. 10 1
65 66.01 humidity 80.0 30 < th dose dependent rect. 10 1
66 66.02 atmosphere 1005.0 30 > th dose independent rect. 10 1
68 66.05 atmosphere 1010.0 30 < th dose independent rect. 10 1
69 66.05 wind 5.0 30 < th dose dependent rect. 10 1
75 66.08 atmosphere 1000.0 30 > th dose dependent rect. 10 1
77 66.09 humidity 60.0 30 > th dose independent rect. 10 1
85 66.14 temperature 10.0 30 > th dose independent rect. 10 1
89 66.14 atmosphere 995.0 30 > th dose independent rect. 10 1
92 66.14 precipitation 0.1 30 < th dose independent rect. 10 1
93 66.14 temperature 10.0 30 > th dose independent rect. 11 23
94 66.14 precipitation 0.1 30 < th dose dependent rect. 10 1
95 66.16 wind 1.0 30 > th dose independent rect. 10 1
97 66.16 radiation 1.0 30 > th dose dependent rect. 10 1
98 66.17 temperature 30.0 30 < th dose independent rect. 10 1
100 66.21 radiation 40.0 30 < th dose independent rect. 10 1
104 66.31 wind 5.0 30 > th dose dependent rect. 1 7
106 66.48 atmosphere 1015.0 30 < th dose dependent rect. 10 1
110 66.65 humidity 50.0 30 > th dose dependent rect. 10 1
112 66.66 radiation 40.0 30 < th dose dependent rect. 10 1
122 66.93 wind 5.0 10 > th dose independent rect. 1 7
124 66.96 wind 1.0 30 > th dose dependent rect. 10 1
141 67.39 wind 5.0 10 > th dose independent rect. 3 5
143 67.40 wind 5.0 10 > th dose independent rect. 5 3
148 67.41 wind 5.0 10 > th dose independent rect. 7 1
216 69.02 atmosphere 995.0 30 > th dose independent rect. 11 23
218 69.05 temperature 30.0 30 < th dose independent rect. 11 23
221 69.35 humidity 80.0 90 < th dose dependent rect. 7 1
230 69.43 precipitation 0.1 30 < th dose independent rect. 11 23
231 69.43 precipitation 0.1 30 < th dose dependent rect. 11 23
271 69.96 wind 9.0 30 < th dose dependent rect. 11 23
291 70.05 temperature 20.0 1440 < th dose dependent rect. 20 1
297 70.14 temperature 20.0 1440 > th dose independent rect. 12 3
300 70.15 temperature 20.0 1440 < th dose independent rect. 12 2
305 70.18 humidity 90.0 1440 > th dose independent rect. 11 2
316 70.21 humidity 90.0 1440 > th dose dependent rect. 12 1
325 70.24 wind 9.0 4320 > th dose independent rect. 3 1
357 70.24 wind 9.0 4320 > th dose dependent rect. 3 1
392 70.25 temperature 20.0 1440 > th dose independent rect. 12 6
401 70.28 humidity 90.0 1440 < th dose independent rect. 12 1
408 70.30 temperature 20.0 1440 < th dose independent rect. 12 6
414 70.34 temperature 20.0 720 < th dose dependent rect. 7 5
419 70.35 temperature 20.0 1440 < th dose dependent rect. 12 1
424 70.37 temperature 20.0 1440 > th dose independent rect. 14 4
438 70.41 temperature 20.0 1440 > th dose independent rect. 17 1
440 70.42 temperature 20.0 1440 < th dose independent rect. 15 3
445 70.44 temperature 20.0 1440 < th dose independent rect. 17 1
478 70.54 temperature 20.0 1440 < th dose dependent rect. 7 15
494 70.62 temperature 25.0 90 > th dose dependent rect. 3 8
499 70.63 temperature 20.0 1440 < th dose dependent sin 19 NA
505 70.64 wind 9.0 720 > th dose independent rect. 17 19
514 70.66 wind 1.0 720 < th dose dependent rect. 7 3
528 70.68 wind 7.0 270 > th dose dependent rect. 16 21
538 70.71 temperature 20.0 270 < th dose dependent rect. 4 8
541 70.71 temperature 20.0 720 < th dose dependent rect. 20 9
546 70.73 wind 9.0 270 > th dose independent sin 9 NA
554 70.73 temperature 20.0 720 < th dose dependent rect. 17 15
583 70.75 temperature 20.0 720 < th dose dependent rect. 1 21
605 70.77 temperature 20.0 720 < th dose dependent sin 12 NA
616 70.77 temperature 20.0 720 < th dose dependent rect. 3 19
622 70.78 temperature 20.0 720 < th dose dependent rect. 1 4
630 70.79 wind 7.0 720 < th dose independent rect. 5 18
637 70.80 wind 7.0 720 < th dose independent rect. 11 12
638 70.80 temperature 20.0 720 < th dose dependent rect. 3 2
648 70.80 wind 9.0 720 > th dose dependent rect. 17 19
660 70.81 temperature 20.0 720 < th dose dependent sin 23 NA
664 70.81 wind 7.0 720 > th dose dependent rect. 9 11
675 70.81 temperature 20.0 720 < th dose dependent rect. 6 23
679 70.82 wind 1.0 4320 < th dose dependent rect. 15 1
683 70.82 temperature 20.0 720 < th dose dependent rect. 24 8
686 70.82 temperature 20.0 720 < th dose dependent rect. 1 11
748 70.83 temperature 20.0 720 < th dose dependent rect. 3 23
752 70.84 radiation 30.0 10 < th dose independent rect. 10 19
755 70.84 temperature 20.0 720 < th dose dependent no NA NA
756 70.84 wind 1.0 4320 < th dose dependent rect. 13 3
804 70.85 wind 7.0 720 > th dose independent rect. 8 12
808 70.85 wind 7.0 720 > th dose dependent sin 1 NA
837 70.86 wind 7.0 30 > th dose independent rect. 18 21
853 70.86 wind 7.0 720 > th dose dependent rect. 24 20
862 70.87 radiation 30.0 270 < th dose independent rect. 7 22
1000 70.93 wind 7.0 720 < th dose independent rect. 11 6